Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ift88Q61371 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ift88Q61371 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ift88Q61371 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.44■□□□□ 0.86
Ift88Q61371 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.44■□□□□ 0.86
Ift88Q61371 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.44■□□□□ 0.86
Ift88Q61371 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ift88Q61371 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ift88Q61371 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ift88Q61371 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ift88Q61371 Gm26833-201ENSMUST00000180899 440 ntBASIC20.44■□□□□ 0.86
Ift88Q61371 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ift88Q61371 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.44■□□□□ 0.86
Ift88Q61371 Gm6139-201ENSMUST00000079261 882 ntBASIC20.44■□□□□ 0.86
Ift88Q61371 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ift88Q61371 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ift88Q61371 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ift88Q61371 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ift88Q61371 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ift88Q61371 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.43■□□□□ 0.86
Ift88Q61371 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ift88Q61371 Gm38205-201ENSMUST00000192243 258 ntBASIC20.43■□□□□ 0.86
Ift88Q61371 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.43■□□□□ 0.86
Ift88Q61371 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ift88Q61371 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ift88Q61371 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ift88Q61371 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ift88Q61371 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ift88Q61371 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ift88Q61371 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ift88Q61371 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Ift88Q61371 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.42■□□□□ 0.86
Ift88Q61371 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.42■□□□□ 0.86
Ift88Q61371 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ift88Q61371 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.42■□□□□ 0.86
Ift88Q61371 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ift88Q61371 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ift88Q61371 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ift88Q61371 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ift88Q61371 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Ift88Q61371 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ift88Q61371 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ift88Q61371 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ift88Q61371 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ift88Q61371 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.42■□□□□ 0.86
Ift88Q61371 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ift88Q61371 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Ift88Q61371 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Ift88Q61371 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ift88Q61371 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ift88Q61371 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ift88Q61371 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Ift88Q61371 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ift88Q61371 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ift88Q61371 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Ift88Q61371 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ift88Q61371 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ift88Q61371 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ift88Q61371 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ift88Q61371 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ift88Q61371 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Ift88Q61371 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ift88Q61371 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ift88Q61371 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ift88Q61371 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ift88Q61371 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ift88Q61371 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.4■□□□□ 0.86
Ift88Q61371 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ift88Q61371 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ift88Q61371 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.4■□□□□ 0.86
Ift88Q61371 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ift88Q61371 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.86
Ift88Q61371 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ift88Q61371 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ift88Q61371 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Ift88Q61371 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ift88Q61371 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Ift88Q61371 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.39■□□□□ 0.85
Ift88Q61371 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.39■□□□□ 0.85
Ift88Q61371 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Ift88Q61371 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Ift88Q61371 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ift88Q61371 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.39■□□□□ 0.85
Ift88Q61371 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ift88Q61371 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Ift88Q61371 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ift88Q61371 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.39■□□□□ 0.85
Ift88Q61371 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ift88Q61371 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ift88Q61371 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ift88Q61371 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.38■□□□□ 0.85
Ift88Q61371 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ift88Q61371 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ift88Q61371 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ift88Q61371 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.38■□□□□ 0.85
Ift88Q61371 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Ift88Q61371 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Ift88Q61371 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ift88Q61371 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ift88Q61371 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms