Protein–RNA interactions for Protein: Q5SWD9

Tsr1, Pre-rRNA-processing protein TSR1 homolog, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsr1Q5SWD9 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC19.79■□□□□ 0.76
Tsr1Q5SWD9 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.79■□□□□ 0.76
Tsr1Q5SWD9 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.79■□□□□ 0.76
Tsr1Q5SWD9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tsr1Q5SWD9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tsr1Q5SWD9 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tsr1Q5SWD9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tsr1Q5SWD9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tsr1Q5SWD9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tsr1Q5SWD9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tsr1Q5SWD9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tsr1Q5SWD9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.78■□□□□ 0.76
Tsr1Q5SWD9 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Tsr1Q5SWD9 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
Tsr1Q5SWD9 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
Tsr1Q5SWD9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tsr1Q5SWD9 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Tsr1Q5SWD9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tsr1Q5SWD9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Tsr1Q5SWD9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tsr1Q5SWD9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tsr1Q5SWD9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tsr1Q5SWD9 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.77■□□□□ 0.76
Tsr1Q5SWD9 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.77■□□□□ 0.76
Tsr1Q5SWD9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tsr1Q5SWD9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tsr1Q5SWD9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tsr1Q5SWD9 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tsr1Q5SWD9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Tsr1Q5SWD9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Tsr1Q5SWD9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.77■□□□□ 0.75
Tsr1Q5SWD9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Tsr1Q5SWD9 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tsr1Q5SWD9 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Tsr1Q5SWD9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tsr1Q5SWD9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tsr1Q5SWD9 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
Tsr1Q5SWD9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tsr1Q5SWD9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tsr1Q5SWD9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tsr1Q5SWD9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tsr1Q5SWD9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tsr1Q5SWD9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tsr1Q5SWD9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Tsr1Q5SWD9 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
Tsr1Q5SWD9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tsr1Q5SWD9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tsr1Q5SWD9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tsr1Q5SWD9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tsr1Q5SWD9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tsr1Q5SWD9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tsr1Q5SWD9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Tsr1Q5SWD9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tsr1Q5SWD9 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tsr1Q5SWD9 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.75■□□□□ 0.75
Tsr1Q5SWD9 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Tsr1Q5SWD9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tsr1Q5SWD9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Tsr1Q5SWD9 Fst-202ENSMUST00000223640 2612 ntBASIC19.75■□□□□ 0.75
Tsr1Q5SWD9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tsr1Q5SWD9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tsr1Q5SWD9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Tsr1Q5SWD9 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tsr1Q5SWD9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tsr1Q5SWD9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tsr1Q5SWD9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tsr1Q5SWD9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tsr1Q5SWD9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Tsr1Q5SWD9 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Tsr1Q5SWD9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tsr1Q5SWD9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tsr1Q5SWD9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tsr1Q5SWD9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tsr1Q5SWD9 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.74■□□□□ 0.75
Tsr1Q5SWD9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tsr1Q5SWD9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tsr1Q5SWD9 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tsr1Q5SWD9 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Tsr1Q5SWD9 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC19.74■□□□□ 0.75
Tsr1Q5SWD9 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tsr1Q5SWD9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tsr1Q5SWD9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Tsr1Q5SWD9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tsr1Q5SWD9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.74■□□□□ 0.75
Tsr1Q5SWD9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
Tsr1Q5SWD9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tsr1Q5SWD9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Tsr1Q5SWD9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tsr1Q5SWD9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
Tsr1Q5SWD9 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.73■□□□□ 0.75
Tsr1Q5SWD9 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.73■□□□□ 0.75
Tsr1Q5SWD9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tsr1Q5SWD9 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tsr1Q5SWD9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tsr1Q5SWD9 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tsr1Q5SWD9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tsr1Q5SWD9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tsr1Q5SWD9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.72■□□□□ 0.75
Tsr1Q5SWD9 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tsr1Q5SWD9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms