Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3-1Q5R1I8 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Trav3-1Q5R1I8 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Trav3-1Q5R1I8 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3-1Q5R1I8 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3-1Q5R1I8 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3-1Q5R1I8 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav3-1Q5R1I8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3-1Q5R1I8 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav3-1Q5R1I8 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3-1Q5R1I8 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav3-1Q5R1I8 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav3-1Q5R1I8 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3-1Q5R1I8 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trav3-1Q5R1I8 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3-1Q5R1I8 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3-1Q5R1I8 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trav3-1Q5R1I8 Gm15853-202ENSMUST00000195518 2041 ntBASIC12.59□□□□□ -0.39
Trav3-1Q5R1I8 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3-1Q5R1I8 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav3-1Q5R1I8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3-1Q5R1I8 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav3-1Q5R1I8 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trav3-1Q5R1I8 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3-1Q5R1I8 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3-1Q5R1I8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3-1Q5R1I8 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3-1Q5R1I8 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3-1Q5R1I8 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav3-1Q5R1I8 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3-1Q5R1I8 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3-1Q5R1I8 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3-1Q5R1I8 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3-1Q5R1I8 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3-1Q5R1I8 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trav3-1Q5R1I8 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3-1Q5R1I8 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3-1Q5R1I8 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Trav3-1Q5R1I8 Gm26917-202ENSMUST00000192833 3329 ntBASIC12.59□□□□□ -0.39
Trav3-1Q5R1I8 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav3-1Q5R1I8 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav3-1Q5R1I8 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav3-1Q5R1I8 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Trav3-1Q5R1I8 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav3-1Q5R1I8 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trav3-1Q5R1I8 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-1Q5R1I8 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Trav3-1Q5R1I8 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-1Q5R1I8 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav3-1Q5R1I8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-1Q5R1I8 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-1Q5R1I8 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-1Q5R1I8 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-1Q5R1I8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-1Q5R1I8 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC12.58□□□□□ -0.4
Trav3-1Q5R1I8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav3-1Q5R1I8 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-1Q5R1I8 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-1Q5R1I8 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav3-1Q5R1I8 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.58□□□□□ -0.4
Trav3-1Q5R1I8 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-1Q5R1I8 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-1Q5R1I8 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav3-1Q5R1I8 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-1Q5R1I8 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3-1Q5R1I8 Gm45774-201ENSMUST00000211992 2665 ntBASIC12.57□□□□□ -0.4
Trav3-1Q5R1I8 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav3-1Q5R1I8 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav3-1Q5R1I8 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Trav3-1Q5R1I8 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3-1Q5R1I8 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3-1Q5R1I8 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3-1Q5R1I8 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3-1Q5R1I8 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3-1Q5R1I8 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3-1Q5R1I8 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3-1Q5R1I8 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3-1Q5R1I8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3-1Q5R1I8 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav3-1Q5R1I8 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3-1Q5R1I8 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3-1Q5R1I8 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3-1Q5R1I8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav3-1Q5R1I8 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav3-1Q5R1I8 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-1Q5R1I8 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC12.56□□□□□ -0.4
Trav3-1Q5R1I8 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC12.56□□□□□ -0.4
Trav3-1Q5R1I8 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-1Q5R1I8 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-1Q5R1I8 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav3-1Q5R1I8 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-1Q5R1I8 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav3-1Q5R1I8 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav3-1Q5R1I8 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Trav3-1Q5R1I8 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav3-1Q5R1I8 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-1Q5R1I8 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-1Q5R1I8 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav3-1Q5R1I8 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-1Q5R1I8 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms