Protein–RNA interactions for Protein: Q5ND28

Scarf1, Scavenger receptor class F member 1, mousemouse

Predictions only

Length 820 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarf1Q5ND28 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scarf1Q5ND28 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scarf1Q5ND28 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scarf1Q5ND28 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Scarf1Q5ND28 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Scarf1Q5ND28 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scarf1Q5ND28 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scarf1Q5ND28 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.25■□□□□ 0.83
Scarf1Q5ND28 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scarf1Q5ND28 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Scarf1Q5ND28 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scarf1Q5ND28 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.24■□□□□ 0.83
Scarf1Q5ND28 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Scarf1Q5ND28 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Scarf1Q5ND28 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Scarf1Q5ND28 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scarf1Q5ND28 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Scarf1Q5ND28 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Scarf1Q5ND28 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scarf1Q5ND28 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scarf1Q5ND28 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Scarf1Q5ND28 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.24■□□□□ 0.83
Scarf1Q5ND28 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Scarf1Q5ND28 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.24■□□□□ 0.83
Scarf1Q5ND28 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scarf1Q5ND28 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scarf1Q5ND28 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scarf1Q5ND28 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scarf1Q5ND28 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scarf1Q5ND28 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scarf1Q5ND28 Gm12441-201ENSMUST00000121806 588 ntBASIC20.23■□□□□ 0.83
Scarf1Q5ND28 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Scarf1Q5ND28 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.23■□□□□ 0.83
Scarf1Q5ND28 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.23■□□□□ 0.83
Scarf1Q5ND28 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Scarf1Q5ND28 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scarf1Q5ND28 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Scarf1Q5ND28 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scarf1Q5ND28 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scarf1Q5ND28 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scarf1Q5ND28 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Scarf1Q5ND28 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scarf1Q5ND28 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scarf1Q5ND28 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scarf1Q5ND28 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Scarf1Q5ND28 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scarf1Q5ND28 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scarf1Q5ND28 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scarf1Q5ND28 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scarf1Q5ND28 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Scarf1Q5ND28 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scarf1Q5ND28 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scarf1Q5ND28 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Scarf1Q5ND28 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scarf1Q5ND28 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.21■□□□□ 0.83
Scarf1Q5ND28 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.21■□□□□ 0.83
Scarf1Q5ND28 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scarf1Q5ND28 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.21■□□□□ 0.83
Scarf1Q5ND28 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Scarf1Q5ND28 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Scarf1Q5ND28 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scarf1Q5ND28 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scarf1Q5ND28 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Scarf1Q5ND28 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scarf1Q5ND28 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scarf1Q5ND28 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scarf1Q5ND28 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.2■□□□□ 0.82
Scarf1Q5ND28 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scarf1Q5ND28 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Scarf1Q5ND28 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Scarf1Q5ND28 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scarf1Q5ND28 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.2■□□□□ 0.82
Scarf1Q5ND28 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.2■□□□□ 0.82
Scarf1Q5ND28 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scarf1Q5ND28 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scarf1Q5ND28 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Scarf1Q5ND28 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.2■□□□□ 0.82
Scarf1Q5ND28 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Scarf1Q5ND28 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.19■□□□□ 0.82
Scarf1Q5ND28 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Scarf1Q5ND28 Gm12527-201ENSMUST00000117967 564 ntBASIC20.19■□□□□ 0.82
Scarf1Q5ND28 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.19■□□□□ 0.82
Scarf1Q5ND28 Gm44549-201ENSMUST00000208351 577 ntBASIC20.19■□□□□ 0.82
Scarf1Q5ND28 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scarf1Q5ND28 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scarf1Q5ND28 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scarf1Q5ND28 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Scarf1Q5ND28 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scarf1Q5ND28 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Scarf1Q5ND28 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.18■□□□□ 0.82
Scarf1Q5ND28 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.18■□□□□ 0.82
Scarf1Q5ND28 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Scarf1Q5ND28 Gm22325-201ENSMUST00000158904 308 ntBASIC20.18■□□□□ 0.82
Scarf1Q5ND28 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scarf1Q5ND28 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scarf1Q5ND28 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Scarf1Q5ND28 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scarf1Q5ND28 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scarf1Q5ND28 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scarf1Q5ND28 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms