Protein–RNA interactions for Protein: Q5BKP2

Usp13, Ubiquitin carboxyl-terminal hydrolase 13, mousemouse

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp13Q5BKP2 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Usp13Q5BKP2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp13Q5BKP2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Usp13Q5BKP2 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp13Q5BKP2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp13Q5BKP2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp13Q5BKP2 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Usp13Q5BKP2 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp13Q5BKP2 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp13Q5BKP2 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Usp13Q5BKP2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp13Q5BKP2 Nespas-201ENSMUST00000143738 1083 ntBASIC20.79■□□□□ 0.92
Usp13Q5BKP2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.79■□□□□ 0.92
Usp13Q5BKP2 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.79■□□□□ 0.92
Usp13Q5BKP2 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp13Q5BKP2 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp13Q5BKP2 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Usp13Q5BKP2 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp13Q5BKP2 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp13Q5BKP2 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp13Q5BKP2 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Usp13Q5BKP2 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.78■□□□□ 0.92
Usp13Q5BKP2 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp13Q5BKP2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp13Q5BKP2 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp13Q5BKP2 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.78■□□□□ 0.92
Usp13Q5BKP2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp13Q5BKP2 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Usp13Q5BKP2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp13Q5BKP2 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp13Q5BKP2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp13Q5BKP2 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp13Q5BKP2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.77■□□□□ 0.92
Usp13Q5BKP2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.77■□□□□ 0.92
Usp13Q5BKP2 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Usp13Q5BKP2 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp13Q5BKP2 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp13Q5BKP2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Usp13Q5BKP2 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Usp13Q5BKP2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp13Q5BKP2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Usp13Q5BKP2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.76■□□□□ 0.91
Usp13Q5BKP2 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.76■□□□□ 0.91
Usp13Q5BKP2 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Usp13Q5BKP2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp13Q5BKP2 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Usp13Q5BKP2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Usp13Q5BKP2 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Usp13Q5BKP2 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.76■□□□□ 0.91
Usp13Q5BKP2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp13Q5BKP2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Usp13Q5BKP2 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp13Q5BKP2 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Usp13Q5BKP2 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp13Q5BKP2 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp13Q5BKP2 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp13Q5BKP2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp13Q5BKP2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp13Q5BKP2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp13Q5BKP2 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp13Q5BKP2 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp13Q5BKP2 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp13Q5BKP2 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Usp13Q5BKP2 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Usp13Q5BKP2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.75■□□□□ 0.91
Usp13Q5BKP2 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Usp13Q5BKP2 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Usp13Q5BKP2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.75■□□□□ 0.91
Usp13Q5BKP2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Usp13Q5BKP2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp13Q5BKP2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp13Q5BKP2 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp13Q5BKP2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp13Q5BKP2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Usp13Q5BKP2 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp13Q5BKP2 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Usp13Q5BKP2 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp13Q5BKP2 Gm10653-202ENSMUST00000139570 835 ntBASIC20.74■□□□□ 0.91
Usp13Q5BKP2 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.74■□□□□ 0.91
Usp13Q5BKP2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Usp13Q5BKP2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Usp13Q5BKP2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp13Q5BKP2 Gm4968-201ENSMUST00000071458 858 ntBASIC20.74■□□□□ 0.91
Usp13Q5BKP2 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Usp13Q5BKP2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp13Q5BKP2 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp13Q5BKP2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.73■□□□□ 0.91
Usp13Q5BKP2 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp13Q5BKP2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp13Q5BKP2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Usp13Q5BKP2 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp13Q5BKP2 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp13Q5BKP2 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp13Q5BKP2 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp13Q5BKP2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.73■□□□□ 0.91
Usp13Q5BKP2 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.72■□□□□ 0.91
Usp13Q5BKP2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp13Q5BKP2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp13Q5BKP2 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Usp13Q5BKP2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms