Protein–RNA interactions for Protein: Q52KF3

Spire1, Protein spire homolog 1, mousemouse

Predictions only

Length 598 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spire1Q52KF3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Spire1Q52KF3 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Spire1Q52KF3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Spire1Q52KF3 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.85■□□□□ 0.61
Spire1Q52KF3 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Spire1Q52KF3 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Spire1Q52KF3 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Spire1Q52KF3 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.85■□□□□ 0.61
Spire1Q52KF3 Gm13836-201ENSMUST00000121159 501 ntBASIC18.85■□□□□ 0.61
Spire1Q52KF3 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Spire1Q52KF3 Gm7977-201ENSMUST00000193787 748 ntBASIC18.85■□□□□ 0.61
Spire1Q52KF3 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Spire1Q52KF3 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Spire1Q52KF3 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Spire1Q52KF3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Spire1Q52KF3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Spire1Q52KF3 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Spire1Q52KF3 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Spire1Q52KF3 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Spire1Q52KF3 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Spire1Q52KF3 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Spire1Q52KF3 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.84■□□□□ 0.61
Spire1Q52KF3 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.84■□□□□ 0.61
Spire1Q52KF3 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.84■□□□□ 0.61
Spire1Q52KF3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Spire1Q52KF3 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Spire1Q52KF3 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Spire1Q52KF3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Spire1Q52KF3 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Spire1Q52KF3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Spire1Q52KF3 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Spire1Q52KF3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Spire1Q52KF3 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Spire1Q52KF3 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.83■□□□□ 0.6
Spire1Q52KF3 Mtag2-201ENSMUST00000058665 714 ntBASIC18.83■□□□□ 0.6
Spire1Q52KF3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Spire1Q52KF3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.83■□□□□ 0.6
Spire1Q52KF3 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Spire1Q52KF3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Spire1Q52KF3 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Spire1Q52KF3 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Spire1Q52KF3 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Spire1Q52KF3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.82■□□□□ 0.6
Spire1Q52KF3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Spire1Q52KF3 Gm38285-201ENSMUST00000192928 922 ntBASIC18.82■□□□□ 0.6
Spire1Q52KF3 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Spire1Q52KF3 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Spire1Q52KF3 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Spire1Q52KF3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Spire1Q52KF3 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Spire1Q52KF3 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.82■□□□□ 0.6
Spire1Q52KF3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Spire1Q52KF3 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Spire1Q52KF3 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Spire1Q52KF3 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Spire1Q52KF3 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.81■□□□□ 0.6
Spire1Q52KF3 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Spire1Q52KF3 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.81■□□□□ 0.6
Spire1Q52KF3 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Spire1Q52KF3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Spire1Q52KF3 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Spire1Q52KF3 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Spire1Q52KF3 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Spire1Q52KF3 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Spire1Q52KF3 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.8■□□□□ 0.6
Spire1Q52KF3 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Spire1Q52KF3 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Spire1Q52KF3 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Spire1Q52KF3 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Spire1Q52KF3 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.8■□□□□ 0.6
Spire1Q52KF3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Spire1Q52KF3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Spire1Q52KF3 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Spire1Q52KF3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
Spire1Q52KF3 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Spire1Q52KF3 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Spire1Q52KF3 Gm15565-201ENSMUST00000118890 427 ntBASIC18.79■□□□□ 0.6
Spire1Q52KF3 Mir5122-201ENSMUST00000175004 89 ntBASIC18.79■□□□□ 0.6
Spire1Q52KF3 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Spire1Q52KF3 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.79■□□□□ 0.6
Spire1Q52KF3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Spire1Q52KF3 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.79■□□□□ 0.6
Spire1Q52KF3 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Spire1Q52KF3 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.79■□□□□ 0.6
Spire1Q52KF3 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Spire1Q52KF3 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Spire1Q52KF3 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Spire1Q52KF3 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Spire1Q52KF3 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Spire1Q52KF3 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Spire1Q52KF3 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Spire1Q52KF3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Spire1Q52KF3 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Spire1Q52KF3 Gm15375-201ENSMUST00000119510 849 ntBASIC18.78■□□□□ 0.6
Spire1Q52KF3 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.78■□□□□ 0.6
Spire1Q52KF3 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.78■□□□□ 0.6
Spire1Q52KF3 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Spire1Q52KF3 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Spire1Q52KF3 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Spire1Q52KF3 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms