Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
R3hdm4Q4VBF2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
R3hdm4Q4VBF2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
R3hdm4Q4VBF2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
R3hdm4Q4VBF2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
R3hdm4Q4VBF2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
R3hdm4Q4VBF2 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
R3hdm4Q4VBF2 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
R3hdm4Q4VBF2 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
R3hdm4Q4VBF2 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
R3hdm4Q4VBF2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
R3hdm4Q4VBF2 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
R3hdm4Q4VBF2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
R3hdm4Q4VBF2 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
R3hdm4Q4VBF2 Gm26524-201ENSMUST00000192339 390 ntBASIC19.96■□□□□ 0.79
R3hdm4Q4VBF2 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.96■□□□□ 0.79
R3hdm4Q4VBF2 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.96■□□□□ 0.79
R3hdm4Q4VBF2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
R3hdm4Q4VBF2 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.96■□□□□ 0.79
R3hdm4Q4VBF2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
R3hdm4Q4VBF2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
R3hdm4Q4VBF2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
R3hdm4Q4VBF2 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
R3hdm4Q4VBF2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
R3hdm4Q4VBF2 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
R3hdm4Q4VBF2 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
R3hdm4Q4VBF2 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.95■□□□□ 0.78
R3hdm4Q4VBF2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
R3hdm4Q4VBF2 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
R3hdm4Q4VBF2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
R3hdm4Q4VBF2 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.95■□□□□ 0.78
R3hdm4Q4VBF2 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.95■□□□□ 0.78
R3hdm4Q4VBF2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
R3hdm4Q4VBF2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
R3hdm4Q4VBF2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
R3hdm4Q4VBF2 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
R3hdm4Q4VBF2 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
R3hdm4Q4VBF2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
R3hdm4Q4VBF2 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
R3hdm4Q4VBF2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
R3hdm4Q4VBF2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
R3hdm4Q4VBF2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
R3hdm4Q4VBF2 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
R3hdm4Q4VBF2 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
R3hdm4Q4VBF2 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
R3hdm4Q4VBF2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
R3hdm4Q4VBF2 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.93■□□□□ 0.78
R3hdm4Q4VBF2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
R3hdm4Q4VBF2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
R3hdm4Q4VBF2 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
R3hdm4Q4VBF2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
R3hdm4Q4VBF2 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
R3hdm4Q4VBF2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
R3hdm4Q4VBF2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
R3hdm4Q4VBF2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
R3hdm4Q4VBF2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
R3hdm4Q4VBF2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
R3hdm4Q4VBF2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
R3hdm4Q4VBF2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
R3hdm4Q4VBF2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.92■□□□□ 0.78
R3hdm4Q4VBF2 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
R3hdm4Q4VBF2 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
R3hdm4Q4VBF2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
R3hdm4Q4VBF2 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
R3hdm4Q4VBF2 Gm5408-201ENSMUST00000197998 747 ntBASIC19.91■□□□□ 0.78
R3hdm4Q4VBF2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
R3hdm4Q4VBF2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
R3hdm4Q4VBF2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
R3hdm4Q4VBF2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
R3hdm4Q4VBF2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
R3hdm4Q4VBF2 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
R3hdm4Q4VBF2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
R3hdm4Q4VBF2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
R3hdm4Q4VBF2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
R3hdm4Q4VBF2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
R3hdm4Q4VBF2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
R3hdm4Q4VBF2 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
R3hdm4Q4VBF2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
R3hdm4Q4VBF2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
R3hdm4Q4VBF2 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
R3hdm4Q4VBF2 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
R3hdm4Q4VBF2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.89■□□□□ 0.77
R3hdm4Q4VBF2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.89■□□□□ 0.77
R3hdm4Q4VBF2 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.89■□□□□ 0.77
R3hdm4Q4VBF2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
R3hdm4Q4VBF2 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
R3hdm4Q4VBF2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
R3hdm4Q4VBF2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.88■□□□□ 0.77
R3hdm4Q4VBF2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.88■□□□□ 0.77
R3hdm4Q4VBF2 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
R3hdm4Q4VBF2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
R3hdm4Q4VBF2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
R3hdm4Q4VBF2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
R3hdm4Q4VBF2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
R3hdm4Q4VBF2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.88■□□□□ 0.77
R3hdm4Q4VBF2 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.88■□□□□ 0.77
R3hdm4Q4VBF2 Gm4968-201ENSMUST00000071458 858 ntBASIC19.88■□□□□ 0.77
R3hdm4Q4VBF2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
R3hdm4Q4VBF2 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
R3hdm4Q4VBF2 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms