Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Herc2Q4U2R1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Herc2Q4U2R1 Gm11950-201ENSMUST00000121615 838 ntBASIC11.13□□□□□ -0.63
Herc2Q4U2R1 Gm10576-201ENSMUST00000191927 825 ntBASIC11.13□□□□□ -0.63
Herc2Q4U2R1 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Herc2Q4U2R1 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Herc2Q4U2R1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Herc2Q4U2R1 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC11.13□□□□□ -0.63
Herc2Q4U2R1 Gm27702-201ENSMUST00000184512 56 ntBASIC11.13□□□□□ -0.63
Herc2Q4U2R1 Gm38027-201ENSMUST00000192315 235 ntBASIC11.13□□□□□ -0.63
Herc2Q4U2R1 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Herc2Q4U2R1 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Herc2Q4U2R1 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Herc2Q4U2R1 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Herc2Q4U2R1 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Herc2Q4U2R1 Gm19094-201ENSMUST00000209791 1246 ntBASIC11.12□□□□□ -0.63
Herc2Q4U2R1 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Herc2Q4U2R1 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Herc2Q4U2R1 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Herc2Q4U2R1 Gm5913-201ENSMUST00000119397 1399 ntBASIC11.12□□□□□ -0.63
Herc2Q4U2R1 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC11.12□□□□□ -0.63
Herc2Q4U2R1 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Herc2Q4U2R1 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Herc2Q4U2R1 Gm9013-201ENSMUST00000132939 882 ntBASIC11.12□□□□□ -0.63
Herc2Q4U2R1 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Herc2Q4U2R1 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Herc2Q4U2R1 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Herc2Q4U2R1 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Herc2Q4U2R1 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Herc2Q4U2R1 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC11.11□□□□□ -0.63
Herc2Q4U2R1 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Herc2Q4U2R1 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Herc2Q4U2R1 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Herc2Q4U2R1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Herc2Q4U2R1 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Herc2Q4U2R1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Herc2Q4U2R1 Gm23935-201ENSMUST00000102303 57 ntBASIC11.11□□□□□ -0.63
Herc2Q4U2R1 Gm24270-201ENSMUST00000102326 57 ntBASIC11.11□□□□□ -0.63
Herc2Q4U2R1 Gm24245-201ENSMUST00000157318 57 ntBASIC11.11□□□□□ -0.63
Herc2Q4U2R1 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Herc2Q4U2R1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Herc2Q4U2R1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Herc2Q4U2R1 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Herc2Q4U2R1 Gm12085-201ENSMUST00000119263 940 ntBASIC11.11□□□□□ -0.63
Herc2Q4U2R1 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC11.11□□□□□ -0.63
Herc2Q4U2R1 AC166341.7-201ENSMUST00000221698 126 ntBASIC11.11□□□□□ -0.63
Herc2Q4U2R1 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Herc2Q4U2R1 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Herc2Q4U2R1 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC11.11□□□□□ -0.63
Herc2Q4U2R1 Gm18195-201ENSMUST00000207604 706 ntBASIC11.11□□□□□ -0.63
Herc2Q4U2R1 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Herc2Q4U2R1 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Herc2Q4U2R1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Herc2Q4U2R1 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Herc2Q4U2R1 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Herc2Q4U2R1 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC11.1□□□□□ -0.63
Herc2Q4U2R1 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC11.1□□□□□ -0.63
Herc2Q4U2R1 Vti1a-206ENSMUST00000225529 1244 ntBASIC11.1□□□□□ -0.63
Herc2Q4U2R1 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Herc2Q4U2R1 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Herc2Q4U2R1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC11.1□□□□□ -0.63
Herc2Q4U2R1 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC11.1□□□□□ -0.63
Herc2Q4U2R1 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Herc2Q4U2R1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Herc2Q4U2R1 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC11.1□□□□□ -0.63
Herc2Q4U2R1 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Herc2Q4U2R1 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Herc2Q4U2R1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Herc2Q4U2R1 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Herc2Q4U2R1 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Herc2Q4U2R1 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Herc2Q4U2R1 Gm13474-201ENSMUST00000122466 815 ntBASIC11.09□□□□□ -0.63
Herc2Q4U2R1 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Herc2Q4U2R1 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Herc2Q4U2R1 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Herc2Q4U2R1 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC11.09□□□□□ -0.63
Herc2Q4U2R1 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Herc2Q4U2R1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Herc2Q4U2R1 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Herc2Q4U2R1 AC157650.3-201ENSMUST00000225058 1476 ntBASIC11.09□□□□□ -0.63
Herc2Q4U2R1 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Herc2Q4U2R1 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Herc2Q4U2R1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC11.09□□□□□ -0.63
Herc2Q4U2R1 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Herc2Q4U2R1 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Herc2Q4U2R1 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Herc2Q4U2R1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Herc2Q4U2R1 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Herc2Q4U2R1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Herc2Q4U2R1 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC11.09□□□□□ -0.63
Herc2Q4U2R1 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Herc2Q4U2R1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Herc2Q4U2R1 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC11.08□□□□□ -0.64
Herc2Q4U2R1 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Herc2Q4U2R1 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Herc2Q4U2R1 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC11.08□□□□□ -0.64
Herc2Q4U2R1 Mir6349-201ENSMUST00000184059 97 ntBASIC11.08□□□□□ -0.64
Herc2Q4U2R1 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Herc2Q4U2R1 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Herc2Q4U2R1 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms