Protein–RNA interactions for Protein: Q3V038

Ttc9, Tetratricopeptide repeat protein 9A, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc9Q3V038 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ttc9Q3V038 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Ttc9Q3V038 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Ttc9Q3V038 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Ttc9Q3V038 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Ttc9Q3V038 Gm715-201ENSMUST00000117865 831 ntBASIC19.74■□□□□ 0.75
Ttc9Q3V038 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Ttc9Q3V038 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Ttc9Q3V038 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Ttc9Q3V038 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Ttc9Q3V038 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Ttc9Q3V038 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ttc9Q3V038 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ttc9Q3V038 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ttc9Q3V038 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ttc9Q3V038 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ttc9Q3V038 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.73■□□□□ 0.75
Ttc9Q3V038 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.73■□□□□ 0.75
Ttc9Q3V038 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ttc9Q3V038 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.73■□□□□ 0.75
Ttc9Q3V038 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.73■□□□□ 0.75
Ttc9Q3V038 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ttc9Q3V038 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ttc9Q3V038 Gm6420-201ENSMUST00000193885 723 ntBASIC19.73■□□□□ 0.75
Ttc9Q3V038 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ttc9Q3V038 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ttc9Q3V038 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ttc9Q3V038 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ttc9Q3V038 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.73■□□□□ 0.75
Ttc9Q3V038 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ttc9Q3V038 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.73■□□□□ 0.75
Ttc9Q3V038 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ttc9Q3V038 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ttc9Q3V038 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ttc9Q3V038 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.72■□□□□ 0.75
Ttc9Q3V038 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ttc9Q3V038 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ttc9Q3V038 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Ttc9Q3V038 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Ttc9Q3V038 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Ttc9Q3V038 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ttc9Q3V038 Gm26524-201ENSMUST00000192339 390 ntBASIC19.72■□□□□ 0.75
Ttc9Q3V038 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.72■□□□□ 0.75
Ttc9Q3V038 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ttc9Q3V038 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ttc9Q3V038 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ttc9Q3V038 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ttc9Q3V038 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ttc9Q3V038 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ttc9Q3V038 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ttc9Q3V038 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ttc9Q3V038 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ttc9Q3V038 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Ttc9Q3V038 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.71■□□□□ 0.75
Ttc9Q3V038 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ttc9Q3V038 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Ttc9Q3V038 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ttc9Q3V038 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Ttc9Q3V038 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.71■□□□□ 0.75
Ttc9Q3V038 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Ttc9Q3V038 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ttc9Q3V038 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ttc9Q3V038 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ttc9Q3V038 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ttc9Q3V038 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ttc9Q3V038 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.7■□□□□ 0.74
Ttc9Q3V038 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ttc9Q3V038 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ttc9Q3V038 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ttc9Q3V038 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.7■□□□□ 0.74
Ttc9Q3V038 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.7■□□□□ 0.74
Ttc9Q3V038 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ttc9Q3V038 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Ttc9Q3V038 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ttc9Q3V038 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ttc9Q3V038 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ttc9Q3V038 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ttc9Q3V038 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.7■□□□□ 0.74
Ttc9Q3V038 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ttc9Q3V038 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ttc9Q3V038 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.69■□□□□ 0.74
Ttc9Q3V038 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ttc9Q3V038 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Ttc9Q3V038 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ttc9Q3V038 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Ttc9Q3V038 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ttc9Q3V038 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ttc9Q3V038 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ttc9Q3V038 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.69■□□□□ 0.74
Ttc9Q3V038 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.69■□□□□ 0.74
Ttc9Q3V038 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Ttc9Q3V038 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Ttc9Q3V038 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ttc9Q3V038 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ttc9Q3V038 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ttc9Q3V038 Golph3-205ENSMUST00000228671 2842 ntBASIC19.69■□□□□ 0.74
Ttc9Q3V038 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ttc9Q3V038 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ttc9Q3V038 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ttc9Q3V038 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms