Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smcr8Q3UMB5 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smcr8Q3UMB5 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.8■□□□□ 0.76
Smcr8Q3UMB5 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.8■□□□□ 0.76
Smcr8Q3UMB5 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.8■□□□□ 0.76
Smcr8Q3UMB5 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smcr8Q3UMB5 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Smcr8Q3UMB5 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smcr8Q3UMB5 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smcr8Q3UMB5 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smcr8Q3UMB5 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Smcr8Q3UMB5 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smcr8Q3UMB5 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smcr8Q3UMB5 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smcr8Q3UMB5 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smcr8Q3UMB5 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Smcr8Q3UMB5 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smcr8Q3UMB5 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smcr8Q3UMB5 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Smcr8Q3UMB5 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.79■□□□□ 0.76
Smcr8Q3UMB5 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Smcr8Q3UMB5 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smcr8Q3UMB5 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smcr8Q3UMB5 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smcr8Q3UMB5 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Smcr8Q3UMB5 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smcr8Q3UMB5 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smcr8Q3UMB5 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.78■□□□□ 0.76
Smcr8Q3UMB5 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Smcr8Q3UMB5 Gm44549-201ENSMUST00000208351 577 ntBASIC19.78■□□□□ 0.76
Smcr8Q3UMB5 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smcr8Q3UMB5 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.78■□□□□ 0.76
Smcr8Q3UMB5 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smcr8Q3UMB5 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Smcr8Q3UMB5 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Smcr8Q3UMB5 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smcr8Q3UMB5 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smcr8Q3UMB5 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smcr8Q3UMB5 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smcr8Q3UMB5 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smcr8Q3UMB5 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.77■□□□□ 0.76
Smcr8Q3UMB5 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smcr8Q3UMB5 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Smcr8Q3UMB5 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smcr8Q3UMB5 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smcr8Q3UMB5 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smcr8Q3UMB5 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smcr8Q3UMB5 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smcr8Q3UMB5 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smcr8Q3UMB5 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smcr8Q3UMB5 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smcr8Q3UMB5 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smcr8Q3UMB5 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smcr8Q3UMB5 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
Smcr8Q3UMB5 Gm10252-201ENSMUST00000209541 832 ntBASIC19.76■□□□□ 0.75
Smcr8Q3UMB5 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Smcr8Q3UMB5 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Smcr8Q3UMB5 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Smcr8Q3UMB5 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smcr8Q3UMB5 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Smcr8Q3UMB5 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smcr8Q3UMB5 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.75■□□□□ 0.75
Smcr8Q3UMB5 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smcr8Q3UMB5 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.75■□□□□ 0.75
Smcr8Q3UMB5 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.75■□□□□ 0.75
Smcr8Q3UMB5 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smcr8Q3UMB5 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smcr8Q3UMB5 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smcr8Q3UMB5 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smcr8Q3UMB5 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Smcr8Q3UMB5 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smcr8Q3UMB5 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
Smcr8Q3UMB5 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smcr8Q3UMB5 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smcr8Q3UMB5 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smcr8Q3UMB5 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smcr8Q3UMB5 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smcr8Q3UMB5 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.74■□□□□ 0.75
Smcr8Q3UMB5 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Smcr8Q3UMB5 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Smcr8Q3UMB5 Dio3-201ENSMUST00000097228 1449 ntBASIC19.74■□□□□ 0.75
Smcr8Q3UMB5 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.74■□□□□ 0.75
Smcr8Q3UMB5 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smcr8Q3UMB5 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.73■□□□□ 0.75
Smcr8Q3UMB5 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smcr8Q3UMB5 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smcr8Q3UMB5 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smcr8Q3UMB5 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Smcr8Q3UMB5 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smcr8Q3UMB5 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smcr8Q3UMB5 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smcr8Q3UMB5 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smcr8Q3UMB5 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.73■□□□□ 0.75
Smcr8Q3UMB5 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smcr8Q3UMB5 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smcr8Q3UMB5 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smcr8Q3UMB5 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smcr8Q3UMB5 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.72■□□□□ 0.75
Smcr8Q3UMB5 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smcr8Q3UMB5 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms