Protein–RNA interactions for Protein: Q3UKJ7

Smu1, WD40 repeat-containing protein SMU1, mousemouse

Known RBP Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smu1Q3UKJ7 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smu1Q3UKJ7 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smu1Q3UKJ7 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Smu1Q3UKJ7 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.71■□□□□ 0.43
Smu1Q3UKJ7 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smu1Q3UKJ7 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.71■□□□□ 0.43
Smu1Q3UKJ7 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.71■□□□□ 0.43
Smu1Q3UKJ7 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smu1Q3UKJ7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.71■□□□□ 0.43
Smu1Q3UKJ7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smu1Q3UKJ7 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smu1Q3UKJ7 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smu1Q3UKJ7 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.71■□□□□ 0.43
Smu1Q3UKJ7 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smu1Q3UKJ7 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Smu1Q3UKJ7 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smu1Q3UKJ7 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Smu1Q3UKJ7 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Smu1Q3UKJ7 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smu1Q3UKJ7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smu1Q3UKJ7 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smu1Q3UKJ7 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smu1Q3UKJ7 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.7■□□□□ 0.42
Smu1Q3UKJ7 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.7■□□□□ 0.42
Smu1Q3UKJ7 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Smu1Q3UKJ7 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smu1Q3UKJ7 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Smu1Q3UKJ7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Smu1Q3UKJ7 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smu1Q3UKJ7 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.7■□□□□ 0.42
Smu1Q3UKJ7 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smu1Q3UKJ7 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smu1Q3UKJ7 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smu1Q3UKJ7 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smu1Q3UKJ7 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smu1Q3UKJ7 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Smu1Q3UKJ7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smu1Q3UKJ7 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.69■□□□□ 0.42
Smu1Q3UKJ7 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Smu1Q3UKJ7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smu1Q3UKJ7 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smu1Q3UKJ7 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Smu1Q3UKJ7 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.69■□□□□ 0.42
Smu1Q3UKJ7 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.69■□□□□ 0.42
Smu1Q3UKJ7 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smu1Q3UKJ7 Gm43060-201ENSMUST00000200621 289 ntBASIC17.69■□□□□ 0.42
Smu1Q3UKJ7 Gm45417-201ENSMUST00000209533 758 ntBASIC17.69■□□□□ 0.42
Smu1Q3UKJ7 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.69■□□□□ 0.42
Smu1Q3UKJ7 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.69■□□□□ 0.42
Smu1Q3UKJ7 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smu1Q3UKJ7 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smu1Q3UKJ7 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smu1Q3UKJ7 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Smu1Q3UKJ7 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smu1Q3UKJ7 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smu1Q3UKJ7 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smu1Q3UKJ7 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smu1Q3UKJ7 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smu1Q3UKJ7 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Smu1Q3UKJ7 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smu1Q3UKJ7 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.68■□□□□ 0.42
Smu1Q3UKJ7 Gm43017-201ENSMUST00000198296 752 ntBASIC17.68■□□□□ 0.42
Smu1Q3UKJ7 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.68■□□□□ 0.42
Smu1Q3UKJ7 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smu1Q3UKJ7 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smu1Q3UKJ7 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smu1Q3UKJ7 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smu1Q3UKJ7 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smu1Q3UKJ7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smu1Q3UKJ7 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smu1Q3UKJ7 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smu1Q3UKJ7 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.67■□□□□ 0.42
Smu1Q3UKJ7 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smu1Q3UKJ7 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smu1Q3UKJ7 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Smu1Q3UKJ7 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.67■□□□□ 0.42
Smu1Q3UKJ7 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smu1Q3UKJ7 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smu1Q3UKJ7 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smu1Q3UKJ7 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.67■□□□□ 0.42
Smu1Q3UKJ7 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smu1Q3UKJ7 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smu1Q3UKJ7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.67■□□□□ 0.42
Smu1Q3UKJ7 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Smu1Q3UKJ7 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.67■□□□□ 0.42
Smu1Q3UKJ7 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smu1Q3UKJ7 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smu1Q3UKJ7 Rarb-207ENSMUST00000225921 2756 ntBASIC17.67■□□□□ 0.42
Smu1Q3UKJ7 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smu1Q3UKJ7 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.67■□□□□ 0.42
Smu1Q3UKJ7 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Smu1Q3UKJ7 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Smu1Q3UKJ7 Gm13146-201ENSMUST00000118508 780 ntBASIC17.66■□□□□ 0.42
Smu1Q3UKJ7 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.66■□□□□ 0.42
Smu1Q3UKJ7 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.66■□□□□ 0.42
Smu1Q3UKJ7 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smu1Q3UKJ7 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smu1Q3UKJ7 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smu1Q3UKJ7 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.66■□□□□ 0.42
Smu1Q3UKJ7 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms