Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Gm38285-201ENSMUST00000192928 922 ntBASIC17.81■□□□□ 0.44
Hoxc4Q08624 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxc4Q08624 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxc4Q08624 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxc4Q08624 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.8■□□□□ 0.44
Hoxc4Q08624 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.8■□□□□ 0.44
Hoxc4Q08624 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc4Q08624 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc4Q08624 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc4Q08624 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Hoxc4Q08624 Gm15378-201ENSMUST00000121894 207 ntBASIC17.8■□□□□ 0.44
Hoxc4Q08624 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Hoxc4Q08624 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.8■□□□□ 0.44
Hoxc4Q08624 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc4Q08624 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc4Q08624 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.8■□□□□ 0.44
Hoxc4Q08624 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxc4Q08624 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxc4Q08624 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxc4Q08624 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxc4Q08624 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxc4Q08624 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Hoxc4Q08624 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxc4Q08624 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxc4Q08624 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxc4Q08624 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxc4Q08624 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.79■□□□□ 0.44
Hoxc4Q08624 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxc4Q08624 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.79■□□□□ 0.44
Hoxc4Q08624 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.79■□□□□ 0.44
Hoxc4Q08624 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.78■□□□□ 0.44
Hoxc4Q08624 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.78■□□□□ 0.44
Hoxc4Q08624 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxc4Q08624 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxc4Q08624 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxc4Q08624 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxc4Q08624 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxc4Q08624 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxc4Q08624 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxc4Q08624 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxc4Q08624 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxc4Q08624 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxc4Q08624 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxc4Q08624 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxc4Q08624 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.77■□□□□ 0.44
Hoxc4Q08624 Gm10698-201ENSMUST00000182663 604 ntBASIC17.77■□□□□ 0.44
Hoxc4Q08624 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.77■□□□□ 0.44
Hoxc4Q08624 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.77■□□□□ 0.44
Hoxc4Q08624 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Hoxc4Q08624 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxc4Q08624 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hoxc4Q08624 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hoxc4Q08624 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hoxc4Q08624 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxc4Q08624 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.76■□□□□ 0.43
Hoxc4Q08624 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxc4Q08624 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.76■□□□□ 0.43
Hoxc4Q08624 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxc4Q08624 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.76■□□□□ 0.43
Hoxc4Q08624 Gm10252-201ENSMUST00000209541 832 ntBASIC17.76■□□□□ 0.43
Hoxc4Q08624 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.76■□□□□ 0.43
Hoxc4Q08624 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxc4Q08624 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.76■□□□□ 0.43
Hoxc4Q08624 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxc4Q08624 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Hoxc4Q08624 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxc4Q08624 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxc4Q08624 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxc4Q08624 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Hoxc4Q08624 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.75■□□□□ 0.43
Hoxc4Q08624 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Hoxc4Q08624 Gm10138-203ENSMUST00000206952 366 ntBASIC17.75■□□□□ 0.43
Hoxc4Q08624 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.75■□□□□ 0.43
Hoxc4Q08624 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxc4Q08624 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Hoxc4Q08624 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxc4Q08624 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxc4Q08624 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxc4Q08624 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.74■□□□□ 0.43
Hoxc4Q08624 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxc4Q08624 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxc4Q08624 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxc4Q08624 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxc4Q08624 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxc4Q08624 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Hoxc4Q08624 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxc4Q08624 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxc4Q08624 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Hoxc4Q08624 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxc4Q08624 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxc4Q08624 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxc4Q08624 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxc4Q08624 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxc4Q08624 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxc4Q08624 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxc4Q08624 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxc4Q08624 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.73■□□□□ 0.43
Hoxc4Q08624 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.73■□□□□ 0.43
Hoxc4Q08624 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.73■□□□□ 0.43
Hoxc4Q08624 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms