Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lig3P97386 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lig3P97386 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Lig3P97386 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lig3P97386 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Lig3P97386 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Lig3P97386 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lig3P97386 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
Lig3P97386 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.01■□□□□ 0.79
Lig3P97386 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lig3P97386 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lig3P97386 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Lig3P97386 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lig3P97386 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
Lig3P97386 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lig3P97386 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lig3P97386 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lig3P97386 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lig3P97386 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Lig3P97386 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lig3P97386 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20■□□□□ 0.79
Lig3P97386 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Lig3P97386 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20■□□□□ 0.79
Lig3P97386 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20■□□□□ 0.79
Lig3P97386 Gm10655-201ENSMUST00000098658 1397 ntBASIC20■□□□□ 0.79
Lig3P97386 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20■□□□□ 0.79
Lig3P97386 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20■□□□□ 0.79
Lig3P97386 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC20■□□□□ 0.79
Lig3P97386 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20■□□□□ 0.79
Lig3P97386 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lig3P97386 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lig3P97386 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Lig3P97386 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
Lig3P97386 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lig3P97386 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Lig3P97386 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lig3P97386 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lig3P97386 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.99■□□□□ 0.79
Lig3P97386 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.99■□□□□ 0.79
Lig3P97386 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Lig3P97386 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lig3P97386 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lig3P97386 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Lig3P97386 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lig3P97386 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lig3P97386 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.99■□□□□ 0.79
Lig3P97386 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lig3P97386 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Lig3P97386 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lig3P97386 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lig3P97386 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.98■□□□□ 0.79
Lig3P97386 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.98■□□□□ 0.79
Lig3P97386 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lig3P97386 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Lig3P97386 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Lig3P97386 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lig3P97386 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lig3P97386 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Lig3P97386 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.97■□□□□ 0.79
Lig3P97386 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lig3P97386 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lig3P97386 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lig3P97386 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lig3P97386 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lig3P97386 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lig3P97386 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lig3P97386 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Lig3P97386 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.97■□□□□ 0.79
Lig3P97386 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
Lig3P97386 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lig3P97386 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Lig3P97386 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lig3P97386 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lig3P97386 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.97■□□□□ 0.79
Lig3P97386 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
Lig3P97386 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lig3P97386 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
Lig3P97386 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Lig3P97386 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Lig3P97386 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.96■□□□□ 0.79
Lig3P97386 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lig3P97386 Gm38205-201ENSMUST00000192243 258 ntBASIC19.96■□□□□ 0.79
Lig3P97386 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.96■□□□□ 0.79
Lig3P97386 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lig3P97386 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lig3P97386 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.96■□□□□ 0.79
Lig3P97386 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lig3P97386 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lig3P97386 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Lig3P97386 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lig3P97386 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Lig3P97386 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lig3P97386 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Lig3P97386 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Lig3P97386 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.95■□□□□ 0.78
Lig3P97386 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
Lig3P97386 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Lig3P97386 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Lig3P97386 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Lig3P97386 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms