Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.48■□□□□ 0.23
SgcbP82349 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.48■□□□□ 0.23
SgcbP82349 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SgcbP82349 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SgcbP82349 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SgcbP82349 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SgcbP82349 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SgcbP82349 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SgcbP82349 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SgcbP82349 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SgcbP82349 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SgcbP82349 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
SgcbP82349 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SgcbP82349 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SgcbP82349 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SgcbP82349 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.47■□□□□ 0.23
SgcbP82349 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SgcbP82349 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SgcbP82349 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SgcbP82349 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.47■□□□□ 0.23
SgcbP82349 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SgcbP82349 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SgcbP82349 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SgcbP82349 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SgcbP82349 Gm5408-201ENSMUST00000197998 747 ntBASIC16.46■□□□□ 0.23
SgcbP82349 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.46■□□□□ 0.23
SgcbP82349 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SgcbP82349 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SgcbP82349 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SgcbP82349 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
SgcbP82349 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
SgcbP82349 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SgcbP82349 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
SgcbP82349 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SgcbP82349 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SgcbP82349 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SgcbP82349 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SgcbP82349 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.45■□□□□ 0.22
SgcbP82349 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SgcbP82349 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
SgcbP82349 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SgcbP82349 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.45■□□□□ 0.22
SgcbP82349 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SgcbP82349 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SgcbP82349 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SgcbP82349 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.45■□□□□ 0.22
SgcbP82349 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SgcbP82349 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SgcbP82349 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SgcbP82349 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SgcbP82349 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SgcbP82349 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SgcbP82349 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SgcbP82349 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
SgcbP82349 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SgcbP82349 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SgcbP82349 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SgcbP82349 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SgcbP82349 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SgcbP82349 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SgcbP82349 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.44■□□□□ 0.22
SgcbP82349 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SgcbP82349 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.44■□□□□ 0.22
SgcbP82349 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SgcbP82349 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SgcbP82349 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SgcbP82349 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SgcbP82349 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SgcbP82349 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SgcbP82349 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SgcbP82349 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SgcbP82349 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SgcbP82349 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SgcbP82349 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SgcbP82349 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
SgcbP82349 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SgcbP82349 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SgcbP82349 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SgcbP82349 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.43■□□□□ 0.22
SgcbP82349 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.43■□□□□ 0.22
SgcbP82349 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.43■□□□□ 0.22
SgcbP82349 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.43■□□□□ 0.22
SgcbP82349 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.43■□□□□ 0.22
SgcbP82349 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SgcbP82349 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SgcbP82349 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
SgcbP82349 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SgcbP82349 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SgcbP82349 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SgcbP82349 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgcbP82349 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgcbP82349 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgcbP82349 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SgcbP82349 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgcbP82349 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgcbP82349 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SgcbP82349 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgcbP82349 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.42■□□□□ 0.22
SgcbP82349 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
SgcbP82349 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms