Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CiitaP79621 Gm13168-201ENSMUST00000121771 632 ntBASIC20.04■□□□□ 0.8
CiitaP79621 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CiitaP79621 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CiitaP79621 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.04■□□□□ 0.8
CiitaP79621 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CiitaP79621 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.04■□□□□ 0.8
CiitaP79621 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CiitaP79621 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CiitaP79621 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CiitaP79621 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CiitaP79621 Gm2399-201ENSMUST00000104944 225 ntBASIC20.03■□□□□ 0.8
CiitaP79621 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.03■□□□□ 0.8
CiitaP79621 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CiitaP79621 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.03■□□□□ 0.8
CiitaP79621 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CiitaP79621 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CiitaP79621 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CiitaP79621 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CiitaP79621 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CiitaP79621 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CiitaP79621 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CiitaP79621 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CiitaP79621 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CiitaP79621 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CiitaP79621 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CiitaP79621 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CiitaP79621 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CiitaP79621 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CiitaP79621 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
CiitaP79621 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.02■□□□□ 0.79
CiitaP79621 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CiitaP79621 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CiitaP79621 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CiitaP79621 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
CiitaP79621 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CiitaP79621 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CiitaP79621 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CiitaP79621 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CiitaP79621 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CiitaP79621 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.01■□□□□ 0.79
CiitaP79621 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.01■□□□□ 0.79
CiitaP79621 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.01■□□□□ 0.79
CiitaP79621 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CiitaP79621 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.01■□□□□ 0.79
CiitaP79621 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CiitaP79621 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CiitaP79621 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CiitaP79621 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CiitaP79621 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CiitaP79621 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CiitaP79621 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CiitaP79621 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CiitaP79621 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.01■□□□□ 0.79
CiitaP79621 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.01■□□□□ 0.79
CiitaP79621 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CiitaP79621 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CiitaP79621 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CiitaP79621 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20■□□□□ 0.79
CiitaP79621 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CiitaP79621 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CiitaP79621 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CiitaP79621 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20■□□□□ 0.79
CiitaP79621 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20■□□□□ 0.79
CiitaP79621 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
CiitaP79621 Gm21596-201ENSMUST00000178049 1316 ntBASIC20■□□□□ 0.79
CiitaP79621 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CiitaP79621 Gm5643-201ENSMUST00000117081 966 ntBASIC19.99■□□□□ 0.79
CiitaP79621 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.99■□□□□ 0.79
CiitaP79621 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CiitaP79621 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.99■□□□□ 0.79
CiitaP79621 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CiitaP79621 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CiitaP79621 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CiitaP79621 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.99■□□□□ 0.79
CiitaP79621 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CiitaP79621 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.99■□□□□ 0.79
CiitaP79621 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.99■□□□□ 0.79
CiitaP79621 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CiitaP79621 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CiitaP79621 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CiitaP79621 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CiitaP79621 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CiitaP79621 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CiitaP79621 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CiitaP79621 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CiitaP79621 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CiitaP79621 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CiitaP79621 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CiitaP79621 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CiitaP79621 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CiitaP79621 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CiitaP79621 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CiitaP79621 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CiitaP79621 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CiitaP79621 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
CiitaP79621 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CiitaP79621 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.98■□□□□ 0.79
CiitaP79621 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CiitaP79621 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms