Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC30.62■■■□□ 2.49
Cux2P70298 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Cux2P70298 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Cux2P70298 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Cux2P70298 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Cux2P70298 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Cux2P70298 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC30.6■■■□□ 2.49
Cux2P70298 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC30.6■■■□□ 2.49
Cux2P70298 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Cux2P70298 Gm10654-201ENSMUST00000098653 1633 ntBASIC30.6■■■□□ 2.49
Cux2P70298 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
Cux2P70298 Gm22697-201ENSMUST00000175194 63 ntBASIC30.6■■■□□ 2.49
Cux2P70298 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Cux2P70298 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC30.6■■■□□ 2.49
Cux2P70298 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Cux2P70298 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Cux2P70298 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Cux2P70298 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
Cux2P70298 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
Cux2P70298 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC30.59■■■□□ 2.49
Cux2P70298 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Cux2P70298 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Cux2P70298 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC30.59■■■□□ 2.49
Cux2P70298 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Cux2P70298 Gm28033-201ENSMUST00000184224 96 ntBASIC30.59■■■□□ 2.49
Cux2P70298 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Cux2P70298 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Cux2P70298 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Cux2P70298 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
Cux2P70298 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC30.58■■■□□ 2.49
Cux2P70298 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC30.58■■■□□ 2.49
Cux2P70298 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC30.58■■■□□ 2.49
Cux2P70298 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Cux2P70298 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Cux2P70298 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Cux2P70298 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Cux2P70298 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Cux2P70298 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
Cux2P70298 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Cux2P70298 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC30.57■■■□□ 2.48
Cux2P70298 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC30.57■■■□□ 2.48
Cux2P70298 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
Cux2P70298 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC30.57■■■□□ 2.48
Cux2P70298 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Cux2P70298 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Cux2P70298 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC30.56■■■□□ 2.48
Cux2P70298 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Cux2P70298 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC30.56■■■□□ 2.48
Cux2P70298 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Cux2P70298 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Cux2P70298 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC30.56■■■□□ 2.48
Cux2P70298 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Cux2P70298 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
Cux2P70298 Gm12085-201ENSMUST00000119263 940 ntBASIC30.56■■■□□ 2.48
Cux2P70298 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Cux2P70298 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC30.55■■■□□ 2.48
Cux2P70298 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
Cux2P70298 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC30.55■■■□□ 2.48
Cux2P70298 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Cux2P70298 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Cux2P70298 Gm2274-201ENSMUST00000184539 609 ntBASIC30.55■■■□□ 2.48
Cux2P70298 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Cux2P70298 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
Cux2P70298 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Cux2P70298 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC30.54■■■□□ 2.48
Cux2P70298 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC30.54■■■□□ 2.48
Cux2P70298 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Cux2P70298 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC30.53■■■□□ 2.48
Cux2P70298 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Cux2P70298 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Cux2P70298 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Cux2P70298 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC30.53■■■□□ 2.48
Cux2P70298 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Cux2P70298 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC30.52■■■□□ 2.48
Cux2P70298 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Cux2P70298 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
Cux2P70298 AC133598.3-202ENSMUST00000224219 531 ntBASIC30.52■■■□□ 2.48
Cux2P70298 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
Cux2P70298 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Cux2P70298 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Cux2P70298 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
Cux2P70298 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
Cux2P70298 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Cux2P70298 Gm25016-201ENSMUST00000158399 131 ntBASIC30.51■■■□□ 2.47
Cux2P70298 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
Cux2P70298 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Cux2P70298 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
Cux2P70298 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Cux2P70298 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC30.5■■■□□ 2.47
Cux2P70298 Gm38027-201ENSMUST00000192315 235 ntBASIC30.5■■■□□ 2.47
Cux2P70298 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC30.5■■■□□ 2.47
Cux2P70298 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Cux2P70298 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Cux2P70298 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC30.49■■■□□ 2.47
Cux2P70298 Gm44771-201ENSMUST00000206975 626 ntBASIC30.49■■■□□ 2.47
Cux2P70298 Dmtn-209ENSMUST00000228295 2572 ntBASIC30.49■■■□□ 2.47
Cux2P70298 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Cux2P70298 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Cux2P70298 Gm8258-201ENSMUST00000055593 1449 ntBASIC30.49■■■□□ 2.47
Cux2P70298 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms