Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim4P70271 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim4P70271 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim4P70271 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim4P70271 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim4P70271 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim4P70271 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim4P70271 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Pdlim4P70271 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim4P70271 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Pdlim4P70271 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim4P70271 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim4P70271 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim4P70271 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim4P70271 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pdlim4P70271 Gm6420-201ENSMUST00000193885 723 ntBASIC15.31■□□□□ 0.04
Pdlim4P70271 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC15.31■□□□□ 0.04
Pdlim4P70271 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Pdlim4P70271 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.31■□□□□ 0.04
Pdlim4P70271 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim4P70271 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim4P70271 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim4P70271 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim4P70271 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim4P70271 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim4P70271 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.31■□□□□ 0.04
Pdlim4P70271 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim4P70271 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.31■□□□□ 0.04
Pdlim4P70271 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim4P70271 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim4P70271 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.31■□□□□ 0.04
Pdlim4P70271 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim4P70271 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pdlim4P70271 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.3■□□□□ 0.04
Pdlim4P70271 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim4P70271 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim4P70271 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim4P70271 Nespas-201ENSMUST00000143738 1083 ntBASIC15.3■□□□□ 0.04
Pdlim4P70271 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pdlim4P70271 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim4P70271 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC15.3■□□□□ 0.04
Pdlim4P70271 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim4P70271 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.3■□□□□ 0.04
Pdlim4P70271 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim4P70271 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim4P70271 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim4P70271 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim4P70271 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim4P70271 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.3■□□□□ 0.04
Pdlim4P70271 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Pdlim4P70271 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim4P70271 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim4P70271 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim4P70271 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Pdlim4P70271 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim4P70271 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim4P70271 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim4P70271 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim4P70271 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim4P70271 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim4P70271 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim4P70271 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.29■□□□□ 0.04
Pdlim4P70271 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.29■□□□□ 0.04
Pdlim4P70271 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC15.29■□□□□ 0.04
Pdlim4P70271 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pdlim4P70271 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim4P70271 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim4P70271 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim4P70271 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim4P70271 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim4P70271 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim4P70271 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.29■□□□□ 0.04
Pdlim4P70271 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim4P70271 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.29■□□□□ 0.04
Pdlim4P70271 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim4P70271 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim4P70271 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim4P70271 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim4P70271 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim4P70271 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim4P70271 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim4P70271 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim4P70271 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim4P70271 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim4P70271 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim4P70271 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim4P70271 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim4P70271 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.28■□□□□ 0.04
Pdlim4P70271 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC15.28■□□□□ 0.04
Pdlim4P70271 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pdlim4P70271 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim4P70271 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim4P70271 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim4P70271 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.27■□□□□ 0.04
Pdlim4P70271 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Pdlim4P70271 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Pdlim4P70271 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pdlim4P70271 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pdlim4P70271 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Pdlim4P70271 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms