Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Traf6P70196 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Traf6P70196 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Traf6P70196 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Traf6P70196 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Traf6P70196 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Traf6P70196 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.16■□□□□ 0.5
Traf6P70196 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Traf6P70196 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Traf6P70196 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Traf6P70196 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.16■□□□□ 0.5
Traf6P70196 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Traf6P70196 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Traf6P70196 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.15■□□□□ 0.5
Traf6P70196 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Traf6P70196 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Traf6P70196 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Traf6P70196 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.15■□□□□ 0.5
Traf6P70196 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.15■□□□□ 0.5
Traf6P70196 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.15■□□□□ 0.5
Traf6P70196 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Traf6P70196 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.14■□□□□ 0.5
Traf6P70196 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.14■□□□□ 0.5
Traf6P70196 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Traf6P70196 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Traf6P70196 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Traf6P70196 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Traf6P70196 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.14■□□□□ 0.49
Traf6P70196 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Traf6P70196 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Traf6P70196 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.14■□□□□ 0.49
Traf6P70196 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Traf6P70196 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Traf6P70196 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Traf6P70196 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Traf6P70196 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Traf6P70196 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Traf6P70196 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Traf6P70196 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Traf6P70196 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Traf6P70196 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Traf6P70196 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.13■□□□□ 0.49
Traf6P70196 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.13■□□□□ 0.49
Traf6P70196 Gm43060-201ENSMUST00000200621 289 ntBASIC18.13■□□□□ 0.49
Traf6P70196 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Traf6P70196 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Traf6P70196 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Traf6P70196 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Traf6P70196 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Traf6P70196 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Traf6P70196 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Traf6P70196 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Traf6P70196 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Traf6P70196 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Traf6P70196 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.12■□□□□ 0.49
Traf6P70196 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.12■□□□□ 0.49
Traf6P70196 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.12■□□□□ 0.49
Traf6P70196 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Traf6P70196 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.12■□□□□ 0.49
Traf6P70196 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Traf6P70196 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.12■□□□□ 0.49
Traf6P70196 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.12■□□□□ 0.49
Traf6P70196 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Traf6P70196 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Traf6P70196 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Traf6P70196 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.12■□□□□ 0.49
Traf6P70196 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Traf6P70196 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Traf6P70196 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Traf6P70196 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Traf6P70196 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Traf6P70196 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.11■□□□□ 0.49
Traf6P70196 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.11■□□□□ 0.49
Traf6P70196 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Traf6P70196 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Traf6P70196 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.11■□□□□ 0.49
Traf6P70196 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Traf6P70196 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Traf6P70196 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Traf6P70196 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Traf6P70196 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Traf6P70196 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Traf6P70196 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.11■□□□□ 0.49
Traf6P70196 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Traf6P70196 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Traf6P70196 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.1■□□□□ 0.49
Traf6P70196 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Traf6P70196 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Traf6P70196 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.1■□□□□ 0.49
Traf6P70196 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Traf6P70196 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Traf6P70196 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Traf6P70196 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Traf6P70196 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Traf6P70196 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Traf6P70196 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Traf6P70196 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Traf6P70196 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Traf6P70196 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Traf6P70196 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms