Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC14.34□□□□□ -0.11
Pfn1P62962 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pfn1P62962 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfn1P62962 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfn1P62962 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfn1P62962 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pfn1P62962 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfn1P62962 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfn1P62962 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfn1P62962 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pfn1P62962 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pfn1P62962 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pfn1P62962 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Pfn1P62962 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfn1P62962 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pfn1P62962 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfn1P62962 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfn1P62962 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.33□□□□□ -0.12
Pfn1P62962 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC14.33□□□□□ -0.12
Pfn1P62962 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC14.33□□□□□ -0.12
Pfn1P62962 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfn1P62962 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfn1P62962 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfn1P62962 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pfn1P62962 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfn1P62962 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfn1P62962 Gm32699-201ENSMUST00000221728 1988 ntBASIC14.33□□□□□ -0.12
Pfn1P62962 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pfn1P62962 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pfn1P62962 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfn1P62962 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pfn1P62962 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pfn1P62962 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfn1P62962 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfn1P62962 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfn1P62962 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pfn1P62962 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfn1P62962 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pfn1P62962 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfn1P62962 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC14.32□□□□□ -0.12
Pfn1P62962 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Pfn1P62962 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pfn1P62962 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfn1P62962 Gm10571-201ENSMUST00000097869 1638 ntBASIC14.32□□□□□ -0.12
Pfn1P62962 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfn1P62962 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfn1P62962 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfn1P62962 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfn1P62962 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfn1P62962 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Pfn1P62962 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.31□□□□□ -0.12
Pfn1P62962 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pfn1P62962 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pfn1P62962 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pfn1P62962 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pfn1P62962 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pfn1P62962 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.31□□□□□ -0.12
Pfn1P62962 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pfn1P62962 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pfn1P62962 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Pfn1P62962 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC14.31□□□□□ -0.12
Pfn1P62962 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pfn1P62962 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.31□□□□□ -0.12
Pfn1P62962 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pfn1P62962 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pfn1P62962 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pfn1P62962 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pfn1P62962 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pfn1P62962 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Pfn1P62962 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC14.31□□□□□ -0.12
Pfn1P62962 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfn1P62962 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfn1P62962 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfn1P62962 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pfn1P62962 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfn1P62962 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Pfn1P62962 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfn1P62962 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfn1P62962 Gm7417-201ENSMUST00000192950 473 ntBASIC14.3□□□□□ -0.12
Pfn1P62962 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfn1P62962 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfn1P62962 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfn1P62962 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfn1P62962 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Pfn1P62962 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pfn1P62962 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pfn1P62962 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC14.29□□□□□ -0.12
Pfn1P62962 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC14.29□□□□□ -0.12
Pfn1P62962 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Pfn1P62962 Gm42501-201ENSMUST00000200220 1026 ntBASIC14.29□□□□□ -0.12
Pfn1P62962 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pfn1P62962 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Pfn1P62962 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pfn1P62962 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pfn1P62962 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pfn1P62962 Gm27045-201ENSMUST00000182145 1402 ntBASIC14.29□□□□□ -0.12
Pfn1P62962 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pfn1P62962 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pfn1P62962 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pfn1P62962 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms