Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl39P62892 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rpl39P62892 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl39P62892 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl39P62892 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl39P62892 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl39P62892 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC13.17□□□□□ -0.3
Rpl39P62892 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl39P62892 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl39P62892 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl39P62892 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl39P62892 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl39P62892 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl39P62892 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl39P62892 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC13.17□□□□□ -0.3
Rpl39P62892 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
Rpl39P62892 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl39P62892 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl39P62892 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl39P62892 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl39P62892 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rpl39P62892 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl39P62892 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl39P62892 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl39P62892 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl39P62892 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl39P62892 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl39P62892 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Rpl39P62892 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpl39P62892 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpl39P62892 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC13.16□□□□□ -0.3
Rpl39P62892 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpl39P62892 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC13.16□□□□□ -0.3
Rpl39P62892 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rpl39P62892 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC13.16□□□□□ -0.3
Rpl39P62892 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rpl39P62892 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC13.16□□□□□ -0.3
Rpl39P62892 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpl39P62892 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC13.16□□□□□ -0.3
Rpl39P62892 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpl39P62892 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Rpl39P62892 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Rpl39P62892 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Rpl39P62892 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rpl39P62892 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Rpl39P62892 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpl39P62892 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpl39P62892 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
Rpl39P62892 Gm10209-201ENSMUST00000203397 1607 ntBASIC13.15□□□□□ -0.3
Rpl39P62892 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Rpl39P62892 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Rpl39P62892 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpl39P62892 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpl39P62892 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rpl39P62892 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpl39P62892 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpl39P62892 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpl39P62892 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpl39P62892 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rpl39P62892 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpl39P62892 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpl39P62892 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rpl39P62892 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Rpl39P62892 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpl39P62892 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rpl39P62892 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpl39P62892 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpl39P62892 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpl39P62892 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rpl39P62892 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpl39P62892 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpl39P62892 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpl39P62892 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC13.14□□□□□ -0.31
Rpl39P62892 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rpl39P62892 Gm22238-201ENSMUST00000175222 88 ntBASIC13.14□□□□□ -0.31
Rpl39P62892 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC13.14□□□□□ -0.31
Rpl39P62892 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpl39P62892 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Rpl39P62892 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Rpl39P62892 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpl39P62892 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC13.14□□□□□ -0.31
Rpl39P62892 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpl39P62892 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rpl39P62892 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpl39P62892 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rpl39P62892 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rpl39P62892 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rpl39P62892 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Rpl39P62892 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rpl39P62892 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rpl39P62892 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rpl39P62892 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rpl39P62892 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rpl39P62892 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rpl39P62892 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rpl39P62892 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rpl39P62892 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rpl39P62892 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rpl39P62892 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rpl39P62892 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms