Protein–RNA interactions for Protein: P62069

Usp46, Ubiquitin carboxyl-terminal hydrolase 46, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp46P62069 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.28■□□□□ 0.68
Usp46P62069 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.28■□□□□ 0.68
Usp46P62069 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Usp46P62069 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Usp46P62069 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp46P62069 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp46P62069 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp46P62069 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Usp46P62069 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Usp46P62069 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Usp46P62069 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Usp46P62069 Gm27275-201ENSMUST00000184318 272 ntBASIC19.27■□□□□ 0.68
Usp46P62069 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp46P62069 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp46P62069 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Usp46P62069 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.27■□□□□ 0.68
Usp46P62069 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Usp46P62069 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Usp46P62069 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Usp46P62069 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp46P62069 Gm12896-201ENSMUST00000118430 226 ntBASIC19.26■□□□□ 0.67
Usp46P62069 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Usp46P62069 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.26■□□□□ 0.67
Usp46P62069 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp46P62069 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Usp46P62069 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Usp46P62069 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp46P62069 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp46P62069 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Usp46P62069 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp46P62069 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp46P62069 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp46P62069 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp46P62069 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp46P62069 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.25■□□□□ 0.67
Usp46P62069 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Usp46P62069 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp46P62069 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp46P62069 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Usp46P62069 Trmt13-210ENSMUST00000198454 880 ntBASIC19.25■□□□□ 0.67
Usp46P62069 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.25■□□□□ 0.67
Usp46P62069 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Usp46P62069 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp46P62069 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp46P62069 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp46P62069 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp46P62069 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Usp46P62069 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp46P62069 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp46P62069 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.24■□□□□ 0.67
Usp46P62069 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp46P62069 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp46P62069 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp46P62069 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp46P62069 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp46P62069 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp46P62069 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Usp46P62069 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Usp46P62069 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp46P62069 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Usp46P62069 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.23■□□□□ 0.67
Usp46P62069 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.23■□□□□ 0.67
Usp46P62069 Gm44549-201ENSMUST00000208351 577 ntBASIC19.23■□□□□ 0.67
Usp46P62069 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp46P62069 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Usp46P62069 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp46P62069 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp46P62069 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp46P62069 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Usp46P62069 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.22■□□□□ 0.67
Usp46P62069 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp46P62069 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Usp46P62069 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp46P62069 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp46P62069 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp46P62069 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp46P62069 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp46P62069 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp46P62069 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.21■□□□□ 0.67
Usp46P62069 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp46P62069 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp46P62069 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp46P62069 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp46P62069 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp46P62069 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp46P62069 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Usp46P62069 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp46P62069 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Usp46P62069 Gm13168-201ENSMUST00000121771 632 ntBASIC19.2■□□□□ 0.66
Usp46P62069 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp46P62069 Gm22240-201ENSMUST00000175225 82 ntBASIC19.2■□□□□ 0.66
Usp46P62069 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.2■□□□□ 0.66
Usp46P62069 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Usp46P62069 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp46P62069 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp46P62069 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp46P62069 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp46P62069 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp46P62069 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp46P62069 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms