Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sssca1P56873 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.92□□□□□ -0.02
Sssca1P56873 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sssca1P56873 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC14.92□□□□□ -0.02
Sssca1P56873 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sssca1P56873 Gm43137-201ENSMUST00000198052 594 ntBASIC14.92□□□□□ -0.02
Sssca1P56873 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sssca1P56873 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Sssca1P56873 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sssca1P56873 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sssca1P56873 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sssca1P56873 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sssca1P56873 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Sssca1P56873 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sssca1P56873 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Sssca1P56873 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sssca1P56873 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sssca1P56873 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sssca1P56873 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sssca1P56873 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.91□□□□□ -0.02
Sssca1P56873 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sssca1P56873 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.91□□□□□ -0.02
Sssca1P56873 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sssca1P56873 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sssca1P56873 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sssca1P56873 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sssca1P56873 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC14.91□□□□□ -0.02
Sssca1P56873 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sssca1P56873 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sssca1P56873 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sssca1P56873 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sssca1P56873 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sssca1P56873 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Sssca1P56873 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sssca1P56873 Gm7860-201ENSMUST00000121190 879 ntBASIC14.9□□□□□ -0.02
Sssca1P56873 AC137127.1-201ENSMUST00000213466 1078 ntBASIC14.9□□□□□ -0.02
Sssca1P56873 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC14.9□□□□□ -0.02
Sssca1P56873 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC14.9□□□□□ -0.02
Sssca1P56873 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sssca1P56873 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sssca1P56873 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.9□□□□□ -0.02
Sssca1P56873 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.9□□□□□ -0.02
Sssca1P56873 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sssca1P56873 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sssca1P56873 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sssca1P56873 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Sssca1P56873 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sssca1P56873 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sssca1P56873 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sssca1P56873 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sssca1P56873 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sssca1P56873 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sssca1P56873 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sssca1P56873 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sssca1P56873 AC165080.2-201ENSMUST00000217491 1530 ntBASIC14.89□□□□□ -0.03
Sssca1P56873 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sssca1P56873 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sssca1P56873 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sssca1P56873 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sssca1P56873 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sssca1P56873 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC14.89□□□□□ -0.03
Sssca1P56873 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sssca1P56873 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sssca1P56873 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sssca1P56873 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sssca1P56873 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sssca1P56873 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Sssca1P56873 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Sssca1P56873 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sssca1P56873 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sssca1P56873 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sssca1P56873 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sssca1P56873 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sssca1P56873 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Sssca1P56873 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sssca1P56873 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sssca1P56873 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sssca1P56873 Gm9847-201ENSMUST00000052528 599 ntBASIC14.88□□□□□ -0.03
Sssca1P56873 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sssca1P56873 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sssca1P56873 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sssca1P56873 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sssca1P56873 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.88□□□□□ -0.03
Sssca1P56873 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sssca1P56873 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sssca1P56873 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sssca1P56873 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sssca1P56873 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sssca1P56873 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sssca1P56873 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Sssca1P56873 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.88□□□□□ -0.03
Sssca1P56873 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Sssca1P56873 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Sssca1P56873 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sssca1P56873 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sssca1P56873 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sssca1P56873 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sssca1P56873 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.87□□□□□ -0.03
Sssca1P56873 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sssca1P56873 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms