Protein–RNA interactions for Protein: P56716

Rp1, Oxygen-regulated protein 1, mousemouse

Predictions only

Length 2,095 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1P56716 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rp1P56716 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rp1P56716 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rp1P56716 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rp1P56716 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.95■□□□□ 0.62
Rp1P56716 Mir6349-201ENSMUST00000184059 97 ntBASIC18.95■□□□□ 0.62
Rp1P56716 Gm43183-201ENSMUST00000200632 547 ntBASIC18.95■□□□□ 0.62
Rp1P56716 Gm42545-201ENSMUST00000202755 922 ntBASIC18.95■□□□□ 0.62
Rp1P56716 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.95■□□□□ 0.62
Rp1P56716 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rp1P56716 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Rp1P56716 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.95■□□□□ 0.62
Rp1P56716 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rp1P56716 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Rp1P56716 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.94■□□□□ 0.62
Rp1P56716 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Rp1P56716 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rp1P56716 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rp1P56716 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rp1P56716 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Rp1P56716 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.94■□□□□ 0.62
Rp1P56716 Gm3375-201ENSMUST00000203929 796 ntBASIC18.94■□□□□ 0.62
Rp1P56716 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rp1P56716 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rp1P56716 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Rp1P56716 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rp1P56716 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rp1P56716 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rp1P56716 Gm37292-201ENSMUST00000192062 758 ntBASIC18.94■□□□□ 0.62
Rp1P56716 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rp1P56716 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rp1P56716 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rp1P56716 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Rp1P56716 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Rp1P56716 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rp1P56716 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rp1P56716 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rp1P56716 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Rp1P56716 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rp1P56716 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
Rp1P56716 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rp1P56716 Timm23-208ENSMUST00000226683 750 ntBASIC18.93■□□□□ 0.62
Rp1P56716 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rp1P56716 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Rp1P56716 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rp1P56716 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rp1P56716 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rp1P56716 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rp1P56716 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rp1P56716 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rp1P56716 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Rp1P56716 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.92■□□□□ 0.62
Rp1P56716 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rp1P56716 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.92■□□□□ 0.62
Rp1P56716 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rp1P56716 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rp1P56716 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Rp1P56716 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rp1P56716 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.91■□□□□ 0.62
Rp1P56716 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Rp1P56716 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rp1P56716 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rp1P56716 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rp1P56716 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rp1P56716 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rp1P56716 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rp1P56716 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rp1P56716 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.9■□□□□ 0.62
Rp1P56716 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Rp1P56716 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Rp1P56716 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rp1P56716 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rp1P56716 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
Rp1P56716 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.89■□□□□ 0.62
Rp1P56716 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.89■□□□□ 0.62
Rp1P56716 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rp1P56716 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Rp1P56716 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rp1P56716 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Rp1P56716 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rp1P56716 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rp1P56716 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rp1P56716 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rp1P56716 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rp1P56716 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Rp1P56716 Gm10231-201ENSMUST00000181584 441 ntBASIC18.89■□□□□ 0.61
Rp1P56716 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rp1P56716 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.89■□□□□ 0.61
Rp1P56716 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rp1P56716 Gm10175-202ENSMUST00000208752 441 ntBASIC18.89■□□□□ 0.61
Rp1P56716 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rp1P56716 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rp1P56716 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.89■□□□□ 0.61
Rp1P56716 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.89■□□□□ 0.61
Rp1P56716 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rp1P56716 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Rp1P56716 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rp1P56716 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rp1P56716 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rp1P56716 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms