Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Rrp1P56183 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rrp1P56183 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Rrp1P56183 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rrp1P56183 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rrp1P56183 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rrp1P56183 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rrp1P56183 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.8■□□□□ 0.92
Rrp1P56183 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.8■□□□□ 0.92
Rrp1P56183 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rrp1P56183 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Rrp1P56183 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.8■□□□□ 0.92
Rrp1P56183 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.8■□□□□ 0.92
Rrp1P56183 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rrp1P56183 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rrp1P56183 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rrp1P56183 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rrp1P56183 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.79■□□□□ 0.92
Rrp1P56183 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Rrp1P56183 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rrp1P56183 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rrp1P56183 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.79■□□□□ 0.92
Rrp1P56183 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.79■□□□□ 0.92
Rrp1P56183 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rrp1P56183 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rrp1P56183 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rrp1P56183 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rrp1P56183 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
Rrp1P56183 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rrp1P56183 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rrp1P56183 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
Rrp1P56183 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rrp1P56183 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rrp1P56183 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rrp1P56183 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.78■□□□□ 0.92
Rrp1P56183 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rrp1P56183 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rrp1P56183 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rrp1P56183 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rrp1P56183 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rrp1P56183 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Rrp1P56183 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.78■□□□□ 0.92
Rrp1P56183 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.78■□□□□ 0.92
Rrp1P56183 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.78■□□□□ 0.92
Rrp1P56183 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rrp1P56183 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rrp1P56183 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rrp1P56183 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Rrp1P56183 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rrp1P56183 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rrp1P56183 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rrp1P56183 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rrp1P56183 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.77■□□□□ 0.92
Rrp1P56183 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.77■□□□□ 0.92
Rrp1P56183 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.77■□□□□ 0.92
Rrp1P56183 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.77■□□□□ 0.92
Rrp1P56183 Gm40848-201ENSMUST00000221998 324 ntBASIC20.77■□□□□ 0.92
Rrp1P56183 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rrp1P56183 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rrp1P56183 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rrp1P56183 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rrp1P56183 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.76■□□□□ 0.91
Rrp1P56183 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rrp1P56183 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rrp1P56183 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
Rrp1P56183 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rrp1P56183 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Rrp1P56183 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.76■□□□□ 0.91
Rrp1P56183 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rrp1P56183 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rrp1P56183 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rrp1P56183 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rrp1P56183 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rrp1P56183 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rrp1P56183 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rrp1P56183 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rrp1P56183 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rrp1P56183 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rrp1P56183 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rrp1P56183 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rrp1P56183 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rrp1P56183 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rrp1P56183 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.75■□□□□ 0.91
Rrp1P56183 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rrp1P56183 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rrp1P56183 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.75■□□□□ 0.91
Rrp1P56183 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rrp1P56183 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rrp1P56183 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Rrp1P56183 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Rrp1P56183 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rrp1P56183 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.74■□□□□ 0.91
Rrp1P56183 Gm26833-201ENSMUST00000180899 440 ntBASIC20.74■□□□□ 0.91
Rrp1P56183 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.74■□□□□ 0.91
Rrp1P56183 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.74■□□□□ 0.91
Rrp1P56183 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rrp1P56183 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rrp1P56183 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rrp1P56183 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rrp1P56183 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms