Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NrlP54846 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.65■□□□□ 0.74
NrlP54846 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.65■□□□□ 0.74
NrlP54846 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NrlP54846 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
NrlP54846 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
NrlP54846 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NrlP54846 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NrlP54846 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NrlP54846 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NrlP54846 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.64■□□□□ 0.73
NrlP54846 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NrlP54846 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NrlP54846 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NrlP54846 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NrlP54846 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NrlP54846 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NrlP54846 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NrlP54846 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NrlP54846 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NrlP54846 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
NrlP54846 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NrlP54846 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NrlP54846 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NrlP54846 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NrlP54846 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NrlP54846 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NrlP54846 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NrlP54846 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
NrlP54846 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NrlP54846 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
NrlP54846 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.63■□□□□ 0.73
NrlP54846 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NrlP54846 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NrlP54846 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NrlP54846 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NrlP54846 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NrlP54846 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NrlP54846 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NrlP54846 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NrlP54846 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
NrlP54846 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
NrlP54846 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NrlP54846 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NrlP54846 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NrlP54846 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.62■□□□□ 0.73
NrlP54846 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NrlP54846 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.62■□□□□ 0.73
NrlP54846 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NrlP54846 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
NrlP54846 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NrlP54846 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NrlP54846 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NrlP54846 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NrlP54846 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NrlP54846 Gm13158-201ENSMUST00000122007 736 ntBASIC19.61■□□□□ 0.73
NrlP54846 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
NrlP54846 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NrlP54846 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
NrlP54846 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
NrlP54846 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NrlP54846 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NrlP54846 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NrlP54846 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NrlP54846 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NrlP54846 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NrlP54846 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
NrlP54846 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
NrlP54846 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.6■□□□□ 0.73
NrlP54846 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
NrlP54846 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
NrlP54846 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NrlP54846 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
NrlP54846 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NrlP54846 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NrlP54846 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
NrlP54846 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
NrlP54846 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NrlP54846 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.59■□□□□ 0.73
NrlP54846 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.59■□□□□ 0.73
NrlP54846 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
NrlP54846 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NrlP54846 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.59■□□□□ 0.73
NrlP54846 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NrlP54846 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NrlP54846 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NrlP54846 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NrlP54846 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
NrlP54846 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.59■□□□□ 0.73
NrlP54846 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
NrlP54846 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
NrlP54846 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
NrlP54846 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NrlP54846 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NrlP54846 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NrlP54846 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NrlP54846 Mir1199-201ENSMUST00000117015 119 ntBASIC19.58■□□□□ 0.72
NrlP54846 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.58■□□□□ 0.72
NrlP54846 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
NrlP54846 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms