Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nub1P54729 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nub1P54729 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nub1P54729 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nub1P54729 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nub1P54729 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nub1P54729 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nub1P54729 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.85■□□□□ 0.77
Nub1P54729 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Nub1P54729 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nub1P54729 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nub1P54729 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nub1P54729 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nub1P54729 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.84■□□□□ 0.77
Nub1P54729 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nub1P54729 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.84■□□□□ 0.77
Nub1P54729 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.84■□□□□ 0.77
Nub1P54729 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.84■□□□□ 0.77
Nub1P54729 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.84■□□□□ 0.77
Nub1P54729 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nub1P54729 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nub1P54729 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nub1P54729 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nub1P54729 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nub1P54729 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.83■□□□□ 0.77
Nub1P54729 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Nub1P54729 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Nub1P54729 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nub1P54729 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Nub1P54729 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nub1P54729 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nub1P54729 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nub1P54729 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nub1P54729 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
Nub1P54729 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.82■□□□□ 0.76
Nub1P54729 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nub1P54729 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.82■□□□□ 0.76
Nub1P54729 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nub1P54729 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Nub1P54729 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
Nub1P54729 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.82■□□□□ 0.76
Nub1P54729 Gm6365-201ENSMUST00000054711 744 ntBASIC19.82■□□□□ 0.76
Nub1P54729 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nub1P54729 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Nub1P54729 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nub1P54729 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nub1P54729 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nub1P54729 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Nub1P54729 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Nub1P54729 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Nub1P54729 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nub1P54729 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Nub1P54729 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Nub1P54729 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nub1P54729 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nub1P54729 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nub1P54729 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nub1P54729 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.81■□□□□ 0.76
Nub1P54729 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nub1P54729 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nub1P54729 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nub1P54729 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nub1P54729 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nub1P54729 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nub1P54729 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nub1P54729 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nub1P54729 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nub1P54729 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Nub1P54729 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.8■□□□□ 0.76
Nub1P54729 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Nub1P54729 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.8■□□□□ 0.76
Nub1P54729 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.8■□□□□ 0.76
Nub1P54729 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Nub1P54729 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.8■□□□□ 0.76
Nub1P54729 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.8■□□□□ 0.76
Nub1P54729 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nub1P54729 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Nub1P54729 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Nub1P54729 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.8■□□□□ 0.76
Nub1P54729 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nub1P54729 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nub1P54729 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nub1P54729 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nub1P54729 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nub1P54729 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nub1P54729 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nub1P54729 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nub1P54729 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
Nub1P54729 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nub1P54729 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nub1P54729 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nub1P54729 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.79■□□□□ 0.76
Nub1P54729 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
Nub1P54729 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.79■□□□□ 0.76
Nub1P54729 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Nub1P54729 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nub1P54729 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nub1P54729 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Nub1P54729 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nub1P54729 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms