Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Msh6P54276 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Msh6P54276 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Msh6P54276 Gm20472-201ENSMUST00000174403 1240 ntBASIC23.57■■□□□ 1.36
Msh6P54276 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
Msh6P54276 Wnt10b-205ENSMUST00000226846 1204 ntBASIC23.57■■□□□ 1.36
Msh6P54276 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
Msh6P54276 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Msh6P54276 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Msh6P54276 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC23.57■■□□□ 1.36
Msh6P54276 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Msh6P54276 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
Msh6P54276 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Msh6P54276 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC23.56■■□□□ 1.36
Msh6P54276 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Msh6P54276 AC175538.1-201ENSMUST00000225343 1269 ntBASIC23.56■■□□□ 1.36
Msh6P54276 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Msh6P54276 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Msh6P54276 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Msh6P54276 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC23.56■■□□□ 1.36
Msh6P54276 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Msh6P54276 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Msh6P54276 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Msh6P54276 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC23.56■■□□□ 1.36
Msh6P54276 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Msh6P54276 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Msh6P54276 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC23.56■■□□□ 1.36
Msh6P54276 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
Msh6P54276 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
Msh6P54276 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Msh6P54276 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Msh6P54276 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC23.55■■□□□ 1.36
Msh6P54276 AC153881.2-201ENSMUST00000214877 204 ntBASIC23.55■■□□□ 1.36
Msh6P54276 AC160393.1-201ENSMUST00000218378 1279 ntBASIC23.55■■□□□ 1.36
Msh6P54276 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Msh6P54276 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Msh6P54276 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Msh6P54276 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC23.54■■□□□ 1.36
Msh6P54276 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Msh6P54276 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Msh6P54276 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Msh6P54276 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Msh6P54276 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
Msh6P54276 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Msh6P54276 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Msh6P54276 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
Msh6P54276 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC23.54■■□□□ 1.36
Msh6P54276 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Msh6P54276 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC23.53■■□□□ 1.36
Msh6P54276 Alkbh1-212ENSMUST00000185301 408 ntBASIC23.53■■□□□ 1.36
Msh6P54276 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Msh6P54276 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
Msh6P54276 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Msh6P54276 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Msh6P54276 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Msh6P54276 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Msh6P54276 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Msh6P54276 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Msh6P54276 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Msh6P54276 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC23.52■■□□□ 1.36
Msh6P54276 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC23.52■■□□□ 1.36
Msh6P54276 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Msh6P54276 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Msh6P54276 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Msh6P54276 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC23.52■■□□□ 1.36
Msh6P54276 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Msh6P54276 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Msh6P54276 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Msh6P54276 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
Msh6P54276 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Msh6P54276 Gm10231-201ENSMUST00000181584 441 ntBASIC23.52■■□□□ 1.36
Msh6P54276 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Msh6P54276 Gm10175-202ENSMUST00000208752 441 ntBASIC23.52■■□□□ 1.36
Msh6P54276 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Msh6P54276 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Msh6P54276 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Msh6P54276 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
Msh6P54276 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Msh6P54276 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC23.51■■□□□ 1.35
Msh6P54276 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC23.51■■□□□ 1.35
Msh6P54276 Gm11927-201ENSMUST00000118472 759 ntBASIC23.51■■□□□ 1.35
Msh6P54276 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Msh6P54276 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Msh6P54276 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Msh6P54276 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Msh6P54276 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Msh6P54276 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Msh6P54276 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Msh6P54276 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Msh6P54276 Gm6433-201ENSMUST00000118634 875 ntBASIC23.5■■□□□ 1.35
Msh6P54276 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC23.5■■□□□ 1.35
Msh6P54276 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Msh6P54276 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC23.5■■□□□ 1.35
Msh6P54276 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Msh6P54276 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Msh6P54276 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Msh6P54276 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Msh6P54276 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Msh6P54276 BC021767-201ENSMUST00000126387 1716 ntBASIC23.49■■□□□ 1.35
Msh6P54276 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms