Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atxn1P54254 Gm5417-201ENSMUST00000079706 384 ntBASIC18.31■□□□□ 0.52
Atxn1P54254 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.31■□□□□ 0.52
Atxn1P54254 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atxn1P54254 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atxn1P54254 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Atxn1P54254 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atxn1P54254 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.3■□□□□ 0.52
Atxn1P54254 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atxn1P54254 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atxn1P54254 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atxn1P54254 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atxn1P54254 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atxn1P54254 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Atxn1P54254 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.3■□□□□ 0.52
Atxn1P54254 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.3■□□□□ 0.52
Atxn1P54254 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atxn1P54254 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atxn1P54254 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atxn1P54254 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atxn1P54254 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.3■□□□□ 0.52
Atxn1P54254 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Atxn1P54254 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Atxn1P54254 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atxn1P54254 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atxn1P54254 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atxn1P54254 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Atxn1P54254 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atxn1P54254 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Atxn1P54254 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.29■□□□□ 0.52
Atxn1P54254 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.29■□□□□ 0.52
Atxn1P54254 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.29■□□□□ 0.52
Atxn1P54254 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atxn1P54254 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atxn1P54254 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Atxn1P54254 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Atxn1P54254 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Atxn1P54254 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Atxn1P54254 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atxn1P54254 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atxn1P54254 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Atxn1P54254 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atxn1P54254 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atxn1P54254 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atxn1P54254 Gm2399-201ENSMUST00000104944 225 ntBASIC18.28■□□□□ 0.52
Atxn1P54254 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.28■□□□□ 0.52
Atxn1P54254 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Atxn1P54254 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atxn1P54254 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atxn1P54254 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.28■□□□□ 0.52
Atxn1P54254 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atxn1P54254 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Atxn1P54254 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Atxn1P54254 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.28■□□□□ 0.52
Atxn1P54254 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.28■□□□□ 0.52
Atxn1P54254 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Atxn1P54254 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.28■□□□□ 0.52
Atxn1P54254 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atxn1P54254 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atxn1P54254 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atxn1P54254 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atxn1P54254 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atxn1P54254 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atxn1P54254 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atxn1P54254 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.27■□□□□ 0.52
Atxn1P54254 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Atxn1P54254 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Atxn1P54254 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Atxn1P54254 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Atxn1P54254 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Atxn1P54254 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atxn1P54254 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atxn1P54254 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Atxn1P54254 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.26■□□□□ 0.51
Atxn1P54254 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atxn1P54254 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atxn1P54254 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atxn1P54254 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Atxn1P54254 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atxn1P54254 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Atxn1P54254 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atxn1P54254 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.25■□□□□ 0.51
Atxn1P54254 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Atxn1P54254 Gm7860-201ENSMUST00000121190 879 ntBASIC18.25■□□□□ 0.51
Atxn1P54254 Gm44549-201ENSMUST00000208351 577 ntBASIC18.25■□□□□ 0.51
Atxn1P54254 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.25■□□□□ 0.51
Atxn1P54254 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atxn1P54254 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Atxn1P54254 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
Atxn1P54254 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Atxn1P54254 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atxn1P54254 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Atxn1P54254 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atxn1P54254 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.24■□□□□ 0.51
Atxn1P54254 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atxn1P54254 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atxn1P54254 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Atxn1P54254 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atxn1P54254 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atxn1P54254 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms