Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RoraP51448 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.42■□□□□ 0.38
RoraP51448 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.42■□□□□ 0.38
RoraP51448 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RoraP51448 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
RoraP51448 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.42■□□□□ 0.38
RoraP51448 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RoraP51448 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RoraP51448 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RoraP51448 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RoraP51448 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.42■□□□□ 0.38
RoraP51448 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RoraP51448 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RoraP51448 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RoraP51448 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RoraP51448 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RoraP51448 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RoraP51448 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RoraP51448 Gm12896-201ENSMUST00000118430 226 ntBASIC17.41■□□□□ 0.38
RoraP51448 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.41■□□□□ 0.38
RoraP51448 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RoraP51448 Gm27275-201ENSMUST00000184318 272 ntBASIC17.41■□□□□ 0.38
RoraP51448 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.41■□□□□ 0.38
RoraP51448 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.41■□□□□ 0.38
RoraP51448 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RoraP51448 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RoraP51448 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RoraP51448 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RoraP51448 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RoraP51448 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RoraP51448 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RoraP51448 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RoraP51448 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RoraP51448 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RoraP51448 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RoraP51448 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RoraP51448 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RoraP51448 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RoraP51448 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RoraP51448 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
RoraP51448 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RoraP51448 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.4■□□□□ 0.38
RoraP51448 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RoraP51448 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RoraP51448 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
RoraP51448 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RoraP51448 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
RoraP51448 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RoraP51448 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
RoraP51448 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RoraP51448 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RoraP51448 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RoraP51448 Gm2559-201ENSMUST00000201323 363 ntBASIC17.39■□□□□ 0.37
RoraP51448 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.39■□□□□ 0.37
RoraP51448 Gm44549-201ENSMUST00000208351 577 ntBASIC17.39■□□□□ 0.37
RoraP51448 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.39■□□□□ 0.37
RoraP51448 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RoraP51448 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RoraP51448 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RoraP51448 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RoraP51448 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RoraP51448 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RoraP51448 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RoraP51448 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RoraP51448 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RoraP51448 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RoraP51448 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.38■□□□□ 0.37
RoraP51448 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RoraP51448 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RoraP51448 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RoraP51448 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RoraP51448 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RoraP51448 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
RoraP51448 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RoraP51448 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RoraP51448 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RoraP51448 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RoraP51448 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
RoraP51448 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RoraP51448 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.37■□□□□ 0.37
RoraP51448 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RoraP51448 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.37■□□□□ 0.37
RoraP51448 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
RoraP51448 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RoraP51448 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RoraP51448 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RoraP51448 Dio3-201ENSMUST00000097228 1449 ntBASIC17.37■□□□□ 0.37
RoraP51448 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.37■□□□□ 0.37
RoraP51448 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.37■□□□□ 0.37
RoraP51448 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RoraP51448 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RoraP51448 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RoraP51448 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RoraP51448 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RoraP51448 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RoraP51448 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RoraP51448 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RoraP51448 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.36■□□□□ 0.37
RoraP51448 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RoraP51448 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms