Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SftpbP50405 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SftpbP50405 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SftpbP50405 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SftpbP50405 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SftpbP50405 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SftpbP50405 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SftpbP50405 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SftpbP50405 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SftpbP50405 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SftpbP50405 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SftpbP50405 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SftpbP50405 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SftpbP50405 Gm43017-201ENSMUST00000198296 752 ntBASIC18.89■□□□□ 0.61
SftpbP50405 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SftpbP50405 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SftpbP50405 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SftpbP50405 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SftpbP50405 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SftpbP50405 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SftpbP50405 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SftpbP50405 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SftpbP50405 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SftpbP50405 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SftpbP50405 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SftpbP50405 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SftpbP50405 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SftpbP50405 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SftpbP50405 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SftpbP50405 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SftpbP50405 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.88■□□□□ 0.61
SftpbP50405 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SftpbP50405 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SftpbP50405 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SftpbP50405 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SftpbP50405 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SftpbP50405 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SftpbP50405 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SftpbP50405 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SftpbP50405 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SftpbP50405 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SftpbP50405 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SftpbP50405 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SftpbP50405 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SftpbP50405 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SftpbP50405 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SftpbP50405 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SftpbP50405 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SftpbP50405 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.87■□□□□ 0.61
SftpbP50405 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SftpbP50405 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SftpbP50405 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SftpbP50405 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SftpbP50405 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SftpbP50405 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SftpbP50405 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.86■□□□□ 0.61
SftpbP50405 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SftpbP50405 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SftpbP50405 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SftpbP50405 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.86■□□□□ 0.61
SftpbP50405 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SftpbP50405 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SftpbP50405 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SftpbP50405 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.86■□□□□ 0.61
SftpbP50405 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.86■□□□□ 0.61
SftpbP50405 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SftpbP50405 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SftpbP50405 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SftpbP50405 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SftpbP50405 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SftpbP50405 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SftpbP50405 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SftpbP50405 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SftpbP50405 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SftpbP50405 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SftpbP50405 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SftpbP50405 Gm38205-201ENSMUST00000192243 258 ntBASIC18.85■□□□□ 0.61
SftpbP50405 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.85■□□□□ 0.61
SftpbP50405 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SftpbP50405 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.85■□□□□ 0.61
SftpbP50405 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SftpbP50405 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SftpbP50405 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SftpbP50405 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SftpbP50405 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.84■□□□□ 0.61
SftpbP50405 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SftpbP50405 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SftpbP50405 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SftpbP50405 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SftpbP50405 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SftpbP50405 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SftpbP50405 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.84■□□□□ 0.61
SftpbP50405 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SftpbP50405 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SftpbP50405 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SftpbP50405 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SftpbP50405 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SftpbP50405 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SftpbP50405 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SftpbP50405 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms