Protein–RNA interactions for Protein: P50404

Sftpd, Pulmonary surfactant-associated protein D, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpdP50404 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SftpdP50404 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SftpdP50404 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.46■□□□□ 0.71
SftpdP50404 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.46■□□□□ 0.71
SftpdP50404 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SftpdP50404 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SftpdP50404 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SftpdP50404 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SftpdP50404 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SftpdP50404 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SftpdP50404 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SftpdP50404 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SftpdP50404 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SftpdP50404 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SftpdP50404 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SftpdP50404 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SftpdP50404 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SftpdP50404 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.45■□□□□ 0.7
SftpdP50404 Gm6365-201ENSMUST00000054711 744 ntBASIC19.45■□□□□ 0.7
SftpdP50404 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SftpdP50404 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SftpdP50404 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SftpdP50404 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.45■□□□□ 0.7
SftpdP50404 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SftpdP50404 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.44■□□□□ 0.7
SftpdP50404 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SftpdP50404 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SftpdP50404 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.44■□□□□ 0.7
SftpdP50404 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SftpdP50404 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.44■□□□□ 0.7
SftpdP50404 Gm37179-201ENSMUST00000194862 823 ntBASIC19.44■□□□□ 0.7
SftpdP50404 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.44■□□□□ 0.7
SftpdP50404 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SftpdP50404 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SftpdP50404 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SftpdP50404 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.44■□□□□ 0.7
SftpdP50404 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SftpdP50404 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SftpdP50404 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
SftpdP50404 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SftpdP50404 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SftpdP50404 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SftpdP50404 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SftpdP50404 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.43■□□□□ 0.7
SftpdP50404 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SftpdP50404 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SftpdP50404 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SftpdP50404 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SftpdP50404 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SftpdP50404 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SftpdP50404 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.42■□□□□ 0.7
SftpdP50404 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.42■□□□□ 0.7
SftpdP50404 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SftpdP50404 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SftpdP50404 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SftpdP50404 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SftpdP50404 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SftpdP50404 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SftpdP50404 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.42■□□□□ 0.7
SftpdP50404 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
SftpdP50404 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SftpdP50404 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SftpdP50404 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SftpdP50404 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SftpdP50404 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SftpdP50404 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SftpdP50404 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SftpdP50404 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SftpdP50404 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.41■□□□□ 0.7
SftpdP50404 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SftpdP50404 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SftpdP50404 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SftpdP50404 Gm7290-201ENSMUST00000104990 617 ntBASIC19.41■□□□□ 0.7
SftpdP50404 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SftpdP50404 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.41■□□□□ 0.7
SftpdP50404 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SftpdP50404 Gm12918-201ENSMUST00000120234 636 ntBASIC19.41■□□□□ 0.7
SftpdP50404 Gm15710-201ENSMUST00000121821 636 ntBASIC19.41■□□□□ 0.7
SftpdP50404 Gm5075-201ENSMUST00000196916 622 ntBASIC19.41■□□□□ 0.7
SftpdP50404 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.41■□□□□ 0.7
SftpdP50404 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SftpdP50404 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.41■□□□□ 0.7
SftpdP50404 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.41■□□□□ 0.7
SftpdP50404 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.41■□□□□ 0.7
SftpdP50404 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SftpdP50404 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SftpdP50404 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.41■□□□□ 0.7
SftpdP50404 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SftpdP50404 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SftpdP50404 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SftpdP50404 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SftpdP50404 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SftpdP50404 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SftpdP50404 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SftpdP50404 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SftpdP50404 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.4■□□□□ 0.7
SftpdP50404 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.4■□□□□ 0.7
SftpdP50404 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.4■□□□□ 0.7
SftpdP50404 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
SftpdP50404 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms