Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LmnaP48678 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LmnaP48678 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LmnaP48678 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.03■□□□□ 0.64
LmnaP48678 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LmnaP48678 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LmnaP48678 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LmnaP48678 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
LmnaP48678 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.03■□□□□ 0.64
LmnaP48678 Gm11643-201ENSMUST00000119578 864 ntBASIC19.03■□□□□ 0.64
LmnaP48678 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.03■□□□□ 0.64
LmnaP48678 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LmnaP48678 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LmnaP48678 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
LmnaP48678 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LmnaP48678 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
LmnaP48678 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LmnaP48678 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LmnaP48678 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LmnaP48678 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LmnaP48678 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
LmnaP48678 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LmnaP48678 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
LmnaP48678 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
LmnaP48678 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
LmnaP48678 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LmnaP48678 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
LmnaP48678 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LmnaP48678 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
LmnaP48678 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
LmnaP48678 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.02■□□□□ 0.64
LmnaP48678 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LmnaP48678 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LmnaP48678 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
LmnaP48678 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
LmnaP48678 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LmnaP48678 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
LmnaP48678 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LmnaP48678 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LmnaP48678 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LmnaP48678 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LmnaP48678 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LmnaP48678 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
LmnaP48678 Gm715-201ENSMUST00000117865 831 ntBASIC19.01■□□□□ 0.63
LmnaP48678 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.01■□□□□ 0.63
LmnaP48678 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
LmnaP48678 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LmnaP48678 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LmnaP48678 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LmnaP48678 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LmnaP48678 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
LmnaP48678 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LmnaP48678 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
LmnaP48678 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LmnaP48678 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
LmnaP48678 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
LmnaP48678 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19■□□□□ 0.63
LmnaP48678 AL672049.1-201ENSMUST00000197943 91 ntBASIC19■□□□□ 0.63
LmnaP48678 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19■□□□□ 0.63
LmnaP48678 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
LmnaP48678 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LmnaP48678 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
LmnaP48678 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19■□□□□ 0.63
LmnaP48678 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
LmnaP48678 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LmnaP48678 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LmnaP48678 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LmnaP48678 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.99■□□□□ 0.63
LmnaP48678 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LmnaP48678 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
LmnaP48678 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.99■□□□□ 0.63
LmnaP48678 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.99■□□□□ 0.63
LmnaP48678 Rab3c-203ENSMUST00000224180 967 ntBASIC18.99■□□□□ 0.63
LmnaP48678 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LmnaP48678 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LmnaP48678 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
LmnaP48678 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.99■□□□□ 0.63
LmnaP48678 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
LmnaP48678 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
LmnaP48678 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
LmnaP48678 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LmnaP48678 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LmnaP48678 Gm26524-201ENSMUST00000192339 390 ntBASIC18.98■□□□□ 0.63
LmnaP48678 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.98■□□□□ 0.63
LmnaP48678 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LmnaP48678 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LmnaP48678 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.98■□□□□ 0.63
LmnaP48678 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LmnaP48678 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
LmnaP48678 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LmnaP48678 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LmnaP48678 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
LmnaP48678 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LmnaP48678 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LmnaP48678 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LmnaP48678 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
LmnaP48678 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.97■□□□□ 0.63
LmnaP48678 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.97■□□□□ 0.63
LmnaP48678 Gm27275-201ENSMUST00000184318 272 ntBASIC18.97■□□□□ 0.63
LmnaP48678 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms