Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Gm8520-201ENSMUST00000186517 868 ntBASIC19.32■□□□□ 0.68
Rfx2P48379 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.32■□□□□ 0.68
Rfx2P48379 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfx2P48379 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx2P48379 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx2P48379 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx2P48379 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Rfx2P48379 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx2P48379 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.31■□□□□ 0.68
Rfx2P48379 Gm20049-201ENSMUST00000219950 730 ntBASIC19.31■□□□□ 0.68
Rfx2P48379 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx2P48379 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Rfx2P48379 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx2P48379 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx2P48379 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx2P48379 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx2P48379 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx2P48379 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Rfx2P48379 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx2P48379 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx2P48379 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx2P48379 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx2P48379 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx2P48379 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.3■□□□□ 0.68
Rfx2P48379 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.3■□□□□ 0.68
Rfx2P48379 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx2P48379 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx2P48379 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx2P48379 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx2P48379 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.3■□□□□ 0.68
Rfx2P48379 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx2P48379 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx2P48379 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Rfx2P48379 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Rfx2P48379 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Rfx2P48379 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx2P48379 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx2P48379 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx2P48379 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx2P48379 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rfx2P48379 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rfx2P48379 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rfx2P48379 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Rfx2P48379 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.29■□□□□ 0.68
Rfx2P48379 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rfx2P48379 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rfx2P48379 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rfx2P48379 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rfx2P48379 Gm22240-201ENSMUST00000175225 82 ntBASIC19.29■□□□□ 0.68
Rfx2P48379 Rab3c-203ENSMUST00000224180 967 ntBASIC19.29■□□□□ 0.68
Rfx2P48379 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rfx2P48379 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rfx2P48379 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rfx2P48379 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.29■□□□□ 0.68
Rfx2P48379 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rfx2P48379 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rfx2P48379 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rfx2P48379 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfx2P48379 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfx2P48379 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfx2P48379 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfx2P48379 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rfx2P48379 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfx2P48379 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.28■□□□□ 0.68
Rfx2P48379 Gm26524-201ENSMUST00000192339 390 ntBASIC19.28■□□□□ 0.68
Rfx2P48379 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfx2P48379 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.27■□□□□ 0.68
Rfx2P48379 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfx2P48379 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.27■□□□□ 0.68
Rfx2P48379 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rfx2P48379 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.27■□□□□ 0.68
Rfx2P48379 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.27■□□□□ 0.68
Rfx2P48379 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfx2P48379 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfx2P48379 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rfx2P48379 Grk6-206ENSMUST00000224995 2971 ntBASIC19.27■□□□□ 0.68
Rfx2P48379 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Rfx2P48379 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfx2P48379 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Rfx2P48379 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.27■□□□□ 0.67
Rfx2P48379 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rfx2P48379 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rfx2P48379 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Rfx2P48379 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Rfx2P48379 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx2P48379 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx2P48379 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx2P48379 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx2P48379 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Rfx2P48379 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx2P48379 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx2P48379 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Rfx2P48379 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx2P48379 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx2P48379 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.26■□□□□ 0.67
Rfx2P48379 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx2P48379 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.26■□□□□ 0.67
Rfx2P48379 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.26■□□□□ 0.67
Rfx2P48379 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx2P48379 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms