Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox18P43680 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.69■□□□□ 0.42
Sox18P43680 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox18P43680 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sox18P43680 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.69■□□□□ 0.42
Sox18P43680 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sox18P43680 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sox18P43680 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox18P43680 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Sox18P43680 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sox18P43680 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox18P43680 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox18P43680 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.68■□□□□ 0.42
Sox18P43680 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox18P43680 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox18P43680 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.68■□□□□ 0.42
Sox18P43680 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sox18P43680 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox18P43680 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sox18P43680 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox18P43680 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sox18P43680 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sox18P43680 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox18P43680 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.67■□□□□ 0.42
Sox18P43680 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox18P43680 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Sox18P43680 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sox18P43680 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox18P43680 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox18P43680 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox18P43680 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Sox18P43680 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox18P43680 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox18P43680 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox18P43680 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox18P43680 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.66■□□□□ 0.42
Sox18P43680 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox18P43680 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sox18P43680 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sox18P43680 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox18P43680 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox18P43680 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.66■□□□□ 0.42
Sox18P43680 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox18P43680 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox18P43680 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox18P43680 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox18P43680 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox18P43680 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox18P43680 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sox18P43680 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Sox18P43680 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Sox18P43680 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox18P43680 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox18P43680 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox18P43680 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox18P43680 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox18P43680 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.65■□□□□ 0.42
Sox18P43680 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sox18P43680 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox18P43680 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.42
Sox18P43680 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sox18P43680 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.64■□□□□ 0.41
Sox18P43680 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sox18P43680 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox18P43680 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Sox18P43680 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.64■□□□□ 0.41
Sox18P43680 Gm11539-201ENSMUST00000119837 557 ntBASIC17.64■□□□□ 0.41
Sox18P43680 Gm13436-201ENSMUST00000120418 567 ntBASIC17.64■□□□□ 0.41
Sox18P43680 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.64■□□□□ 0.41
Sox18P43680 Gm7889-201ENSMUST00000185591 958 ntBASIC17.64■□□□□ 0.41
Sox18P43680 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.64■□□□□ 0.41
Sox18P43680 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox18P43680 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox18P43680 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox18P43680 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.64■□□□□ 0.41
Sox18P43680 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sox18P43680 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sox18P43680 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox18P43680 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sox18P43680 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox18P43680 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox18P43680 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox18P43680 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox18P43680 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sox18P43680 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox18P43680 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox18P43680 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.63■□□□□ 0.41
Sox18P43680 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox18P43680 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
Sox18P43680 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Sox18P43680 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.63■□□□□ 0.41
Sox18P43680 Gm18101-201ENSMUST00000215769 548 ntBASIC17.63■□□□□ 0.41
Sox18P43680 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.63■□□□□ 0.41
Sox18P43680 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sox18P43680 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox18P43680 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox18P43680 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sox18P43680 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Sox18P43680 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox18P43680 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms