Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-2P42586 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-2P42586 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-2P42586 Gm6365-201ENSMUST00000054711 744 ntBASIC16.94■□□□□ 0.3
Nkx2-2P42586 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-2P42586 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-2P42586 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-2P42586 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-2P42586 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-2P42586 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Nkx2-2P42586 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-2P42586 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-2P42586 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-2P42586 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Nkx2-2P42586 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-2P42586 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-2P42586 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-2P42586 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-2P42586 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-2P42586 Gm7290-201ENSMUST00000104990 617 ntBASIC16.93■□□□□ 0.3
Nkx2-2P42586 Gm12918-201ENSMUST00000120234 636 ntBASIC16.93■□□□□ 0.3
Nkx2-2P42586 Gm15710-201ENSMUST00000121821 636 ntBASIC16.93■□□□□ 0.3
Nkx2-2P42586 Gm5075-201ENSMUST00000196916 622 ntBASIC16.93■□□□□ 0.3
Nkx2-2P42586 Gm7291-201ENSMUST00000199147 382 ntBASIC16.93■□□□□ 0.3
Nkx2-2P42586 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.93■□□□□ 0.3
Nkx2-2P42586 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Nkx2-2P42586 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-2P42586 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-2P42586 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.93■□□□□ 0.3
Nkx2-2P42586 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.93■□□□□ 0.3
Nkx2-2P42586 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-2P42586 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-2P42586 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-2P42586 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx2-2P42586 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx2-2P42586 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Nkx2-2P42586 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx2-2P42586 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx2-2P42586 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Nkx2-2P42586 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx2-2P42586 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx2-2P42586 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.92■□□□□ 0.3
Nkx2-2P42586 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.92■□□□□ 0.3
Nkx2-2P42586 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Nkx2-2P42586 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx2-2P42586 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx2-2P42586 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Nkx2-2P42586 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.91■□□□□ 0.3
Nkx2-2P42586 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nkx2-2P42586 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Nkx2-2P42586 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nkx2-2P42586 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.91■□□□□ 0.3
Nkx2-2P42586 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nkx2-2P42586 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Nkx2-2P42586 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nkx2-2P42586 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nkx2-2P42586 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Nkx2-2P42586 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx2-2P42586 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx2-2P42586 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx2-2P42586 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx2-2P42586 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx2-2P42586 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.9■□□□□ 0.3
Nkx2-2P42586 Gm22325-201ENSMUST00000158904 308 ntBASIC16.9■□□□□ 0.3
Nkx2-2P42586 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.9■□□□□ 0.3
Nkx2-2P42586 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.9■□□□□ 0.3
Nkx2-2P42586 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx2-2P42586 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx2-2P42586 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx2-2P42586 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Nkx2-2P42586 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx2-2P42586 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx2-2P42586 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx2-2P42586 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Nkx2-2P42586 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx2-2P42586 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx2-2P42586 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Nkx2-2P42586 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
Nkx2-2P42586 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx2-2P42586 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.89■□□□□ 0.29
Nkx2-2P42586 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Nkx2-2P42586 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx2-2P42586 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx2-2P42586 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx2-2P42586 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx2-2P42586 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx2-2P42586 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
Nkx2-2P42586 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.89■□□□□ 0.29
Nkx2-2P42586 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Nkx2-2P42586 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx2-2P42586 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx2-2P42586 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx2-2P42586 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx2-2P42586 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx2-2P42586 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx2-2P42586 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-2P42586 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Nkx2-2P42586 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Nkx2-2P42586 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-2P42586 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms