Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Abca1P41233 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Abca1P41233 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Abca1P41233 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Abca1P41233 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Abca1P41233 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
Abca1P41233 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.27■□□□□ 0.03
Abca1P41233 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.27■□□□□ 0.03
Abca1P41233 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.27■□□□□ 0.03
Abca1P41233 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
Abca1P41233 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Abca1P41233 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Abca1P41233 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Abca1P41233 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Abca1P41233 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Abca1P41233 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC15.26■□□□□ 0.03
Abca1P41233 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Abca1P41233 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Abca1P41233 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Abca1P41233 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Abca1P41233 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Abca1P41233 Gm11643-201ENSMUST00000119578 864 ntBASIC15.26■□□□□ 0.03
Abca1P41233 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.26■□□□□ 0.03
Abca1P41233 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Abca1P41233 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Abca1P41233 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Abca1P41233 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Abca1P41233 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Abca1P41233 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Abca1P41233 Mir1199-201ENSMUST00000117015 119 ntBASIC15.26■□□□□ 0.03
Abca1P41233 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Abca1P41233 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Abca1P41233 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Abca1P41233 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Abca1P41233 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Abca1P41233 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.25■□□□□ 0.03
Abca1P41233 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Abca1P41233 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Abca1P41233 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Abca1P41233 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Abca1P41233 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.25■□□□□ 0.03
Abca1P41233 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Abca1P41233 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Abca1P41233 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Abca1P41233 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.25■□□□□ 0.03
Abca1P41233 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Abca1P41233 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Abca1P41233 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Abca1P41233 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Abca1P41233 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Abca1P41233 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Abca1P41233 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Abca1P41233 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Abca1P41233 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Abca1P41233 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Abca1P41233 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Abca1P41233 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Abca1P41233 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Abca1P41233 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Abca1P41233 Gm10698-201ENSMUST00000182663 604 ntBASIC15.24■□□□□ 0.03
Abca1P41233 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Abca1P41233 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Abca1P41233 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Abca1P41233 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Abca1P41233 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Abca1P41233 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Abca1P41233 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Abca1P41233 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Abca1P41233 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Abca1P41233 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Abca1P41233 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Abca1P41233 Gm15378-201ENSMUST00000121894 207 ntBASIC15.23■□□□□ 0.03
Abca1P41233 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Abca1P41233 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Abca1P41233 Gm9987-201ENSMUST00000069768 567 ntBASIC15.23■□□□□ 0.03
Abca1P41233 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Abca1P41233 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Abca1P41233 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Abca1P41233 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.23■□□□□ 0.03
Abca1P41233 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Abca1P41233 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.23■□□□□ 0.03
Abca1P41233 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.23■□□□□ 0.03
Abca1P41233 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.23■□□□□ 0.03
Abca1P41233 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Abca1P41233 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Abca1P41233 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Abca1P41233 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Abca1P41233 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Abca1P41233 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Abca1P41233 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Abca1P41233 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Abca1P41233 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Abca1P41233 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.22■□□□□ 0.03
Abca1P41233 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Abca1P41233 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Abca1P41233 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Abca1P41233 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Abca1P41233 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Abca1P41233 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
Abca1P41233 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms