Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkn1aP39689 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkn1aP39689 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Cdkn1aP39689 Gm13168-201ENSMUST00000121771 632 ntBASIC15.23■□□□□ 0.03
Cdkn1aP39689 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.23■□□□□ 0.03
Cdkn1aP39689 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkn1aP39689 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkn1aP39689 Gm22240-201ENSMUST00000175225 82 ntBASIC15.23■□□□□ 0.03
Cdkn1aP39689 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkn1aP39689 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkn1aP39689 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkn1aP39689 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkn1aP39689 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkn1aP39689 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkn1aP39689 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkn1aP39689 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cdkn1aP39689 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkn1aP39689 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkn1aP39689 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkn1aP39689 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cdkn1aP39689 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkn1aP39689 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkn1aP39689 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cdkn1aP39689 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkn1aP39689 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdkn1aP39689 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdkn1aP39689 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.21■□□□□ 0.03
Cdkn1aP39689 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.21■□□□□ 0.03
Cdkn1aP39689 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdkn1aP39689 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdkn1aP39689 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.21■□□□□ 0.03
Cdkn1aP39689 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.21■□□□□ 0.03
Cdkn1aP39689 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdkn1aP39689 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdkn1aP39689 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdkn1aP39689 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.21■□□□□ 0.03
Cdkn1aP39689 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdkn1aP39689 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC15.21■□□□□ 0.03
Cdkn1aP39689 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdkn1aP39689 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cdkn1aP39689 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cdkn1aP39689 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cdkn1aP39689 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cdkn1aP39689 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdkn1aP39689 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cdkn1aP39689 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdkn1aP39689 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdkn1aP39689 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cdkn1aP39689 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cdkn1aP39689 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.2■□□□□ 0.02
Cdkn1aP39689 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdkn1aP39689 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdkn1aP39689 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdkn1aP39689 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Cdkn1aP39689 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.2■□□□□ 0.02
Cdkn1aP39689 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdkn1aP39689 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdkn1aP39689 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Cdkn1aP39689 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdkn1aP39689 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdkn1aP39689 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdkn1aP39689 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdkn1aP39689 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdkn1aP39689 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Cdkn1aP39689 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC15.19■□□□□ 0.02
Cdkn1aP39689 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdkn1aP39689 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdkn1aP39689 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdkn1aP39689 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.19■□□□□ 0.02
Cdkn1aP39689 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Cdkn1aP39689 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdkn1aP39689 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdkn1aP39689 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Cdkn1aP39689 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdkn1aP39689 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdkn1aP39689 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdkn1aP39689 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Cdkn1aP39689 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.19■□□□□ 0.02
Cdkn1aP39689 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdkn1aP39689 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdkn1aP39689 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdkn1aP39689 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdkn1aP39689 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdkn1aP39689 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.18■□□□□ 0.02
Cdkn1aP39689 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdkn1aP39689 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdkn1aP39689 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdkn1aP39689 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdkn1aP39689 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdkn1aP39689 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdkn1aP39689 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.18■□□□□ 0.02
Cdkn1aP39689 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdkn1aP39689 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdkn1aP39689 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Cdkn1aP39689 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdkn1aP39689 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdkn1aP39689 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdkn1aP39689 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdkn1aP39689 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdkn1aP39689 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms