Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sox5P35710 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sox5P35710 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.16■□□□□ 0.82
Sox5P35710 Gm12821-201ENSMUST00000120022 600 ntBASIC20.16■□□□□ 0.82
Sox5P35710 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.16■□□□□ 0.82
Sox5P35710 Gm26833-201ENSMUST00000180899 440 ntBASIC20.16■□□□□ 0.82
Sox5P35710 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sox5P35710 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sox5P35710 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.16■□□□□ 0.82
Sox5P35710 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.16■□□□□ 0.82
Sox5P35710 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sox5P35710 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sox5P35710 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sox5P35710 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.16■□□□□ 0.82
Sox5P35710 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sox5P35710 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sox5P35710 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.15■□□□□ 0.82
Sox5P35710 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.15■□□□□ 0.82
Sox5P35710 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.15■□□□□ 0.82
Sox5P35710 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.15■□□□□ 0.82
Sox5P35710 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sox5P35710 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sox5P35710 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sox5P35710 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Sox5P35710 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.15■□□□□ 0.82
Sox5P35710 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.15■□□□□ 0.82
Sox5P35710 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sox5P35710 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sox5P35710 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Sox5P35710 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Sox5P35710 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sox5P35710 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
Sox5P35710 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sox5P35710 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sox5P35710 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sox5P35710 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.14■□□□□ 0.81
Sox5P35710 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Sox5P35710 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sox5P35710 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sox5P35710 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sox5P35710 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Sox5P35710 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Sox5P35710 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sox5P35710 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sox5P35710 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sox5P35710 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.13■□□□□ 0.81
Sox5P35710 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sox5P35710 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.13■□□□□ 0.81
Sox5P35710 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sox5P35710 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.13■□□□□ 0.81
Sox5P35710 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sox5P35710 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.13■□□□□ 0.81
Sox5P35710 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sox5P35710 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sox5P35710 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sox5P35710 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Sox5P35710 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sox5P35710 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Sox5P35710 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Sox5P35710 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Sox5P35710 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.12■□□□□ 0.81
Sox5P35710 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sox5P35710 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sox5P35710 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sox5P35710 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sox5P35710 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.12■□□□□ 0.81
Sox5P35710 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sox5P35710 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.11■□□□□ 0.81
Sox5P35710 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Sox5P35710 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sox5P35710 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.11■□□□□ 0.81
Sox5P35710 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sox5P35710 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sox5P35710 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.11■□□□□ 0.81
Sox5P35710 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.11■□□□□ 0.81
Sox5P35710 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sox5P35710 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sox5P35710 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sox5P35710 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sox5P35710 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sox5P35710 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sox5P35710 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sox5P35710 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Sox5P35710 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Sox5P35710 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.1■□□□□ 0.81
Sox5P35710 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Sox5P35710 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Sox5P35710 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sox5P35710 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sox5P35710 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.1■□□□□ 0.81
Sox5P35710 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sox5P35710 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sox5P35710 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sox5P35710 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sox5P35710 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Sox5P35710 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Sox5P35710 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sox5P35710 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sox5P35710 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Sox5P35710 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms