Protein–RNA interactions for Protein: P35584

Foxa3, Hepatocyte nuclear factor 3-gamma, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa3P35584 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Foxa3P35584 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Foxa3P35584 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Foxa3P35584 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Foxa3P35584 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Foxa3P35584 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Foxa3P35584 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Foxa3P35584 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Foxa3P35584 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Foxa3P35584 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Foxa3P35584 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Foxa3P35584 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Foxa3P35584 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.4■□□□□ 0.06
Foxa3P35584 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Foxa3P35584 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.4■□□□□ 0.06
Foxa3P35584 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Foxa3P35584 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Foxa3P35584 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Foxa3P35584 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Foxa3P35584 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Foxa3P35584 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Foxa3P35584 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Foxa3P35584 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Foxa3P35584 Gm5522-201ENSMUST00000189483 1242 ntBASIC15.39■□□□□ 0.05
Foxa3P35584 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.39■□□□□ 0.05
Foxa3P35584 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Foxa3P35584 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Foxa3P35584 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Foxa3P35584 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Foxa3P35584 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Foxa3P35584 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Foxa3P35584 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Foxa3P35584 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Foxa3P35584 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Foxa3P35584 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Foxa3P35584 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Foxa3P35584 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Foxa3P35584 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Foxa3P35584 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Foxa3P35584 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Foxa3P35584 Gm15546-201ENSMUST00000122095 826 ntBASIC15.38■□□□□ 0.05
Foxa3P35584 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Foxa3P35584 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC15.38■□□□□ 0.05
Foxa3P35584 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.38■□□□□ 0.05
Foxa3P35584 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Foxa3P35584 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Foxa3P35584 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
Foxa3P35584 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Foxa3P35584 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Foxa3P35584 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Foxa3P35584 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Foxa3P35584 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Foxa3P35584 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Foxa3P35584 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Foxa3P35584 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Foxa3P35584 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.37■□□□□ 0.05
Foxa3P35584 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Foxa3P35584 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Foxa3P35584 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC15.37■□□□□ 0.05
Foxa3P35584 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Foxa3P35584 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Foxa3P35584 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Foxa3P35584 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Foxa3P35584 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Foxa3P35584 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Foxa3P35584 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.37■□□□□ 0.05
Foxa3P35584 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Foxa3P35584 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Foxa3P35584 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Foxa3P35584 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Foxa3P35584 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Foxa3P35584 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Foxa3P35584 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC15.36■□□□□ 0.05
Foxa3P35584 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC15.36■□□□□ 0.05
Foxa3P35584 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC15.36■□□□□ 0.05
Foxa3P35584 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Foxa3P35584 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Foxa3P35584 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Foxa3P35584 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.36■□□□□ 0.05
Foxa3P35584 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.36■□□□□ 0.05
Foxa3P35584 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Foxa3P35584 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Foxa3P35584 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Foxa3P35584 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.36■□□□□ 0.05
Foxa3P35584 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.35■□□□□ 0.05
Foxa3P35584 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxa3P35584 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxa3P35584 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Foxa3P35584 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Foxa3P35584 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.35■□□□□ 0.05
Foxa3P35584 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.35■□□□□ 0.05
Foxa3P35584 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.35■□□□□ 0.05
Foxa3P35584 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
Foxa3P35584 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
Foxa3P35584 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Foxa3P35584 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxa3P35584 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Foxa3P35584 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Foxa3P35584 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxa3P35584 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms