Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Tnfrsf9P20334 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfrsf9P20334 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Tnfrsf9P20334 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfrsf9P20334 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Tnfrsf9P20334 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfrsf9P20334 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfrsf9P20334 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfrsf9P20334 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.95□□□□□ -0.02
Tnfrsf9P20334 Gm13836-201ENSMUST00000121159 501 ntBASIC14.95□□□□□ -0.02
Tnfrsf9P20334 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfrsf9P20334 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfrsf9P20334 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfrsf9P20334 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Tnfrsf9P20334 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.95□□□□□ -0.02
Tnfrsf9P20334 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Tnfrsf9P20334 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfrsf9P20334 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfrsf9P20334 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfrsf9P20334 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfrsf9P20334 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf9P20334 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Tnfrsf9P20334 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf9P20334 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf9P20334 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf9P20334 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Tnfrsf9P20334 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf9P20334 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf9P20334 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf9P20334 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC14.94□□□□□ -0.02
Tnfrsf9P20334 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf9P20334 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Tnfrsf9P20334 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf9P20334 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf9P20334 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf9P20334 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf9P20334 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf9P20334 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf9P20334 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf9P20334 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Tnfrsf9P20334 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf9P20334 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf9P20334 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf9P20334 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf9P20334 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Tnfrsf9P20334 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfrsf9P20334 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfrsf9P20334 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Tnfrsf9P20334 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfrsf9P20334 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfrsf9P20334 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfrsf9P20334 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfrsf9P20334 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfrsf9P20334 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfrsf9P20334 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Tnfrsf9P20334 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfrsf9P20334 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfrsf9P20334 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfrsf9P20334 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Tnfrsf9P20334 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfrsf9P20334 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfrsf9P20334 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfrsf9P20334 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfrsf9P20334 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.92□□□□□ -0.02
Tnfrsf9P20334 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfrsf9P20334 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfrsf9P20334 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfrsf9P20334 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfrsf9P20334 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfrsf9P20334 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfrsf9P20334 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfrsf9P20334 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfrsf9P20334 Gm10655-201ENSMUST00000098658 1397 ntBASIC14.92□□□□□ -0.02
Tnfrsf9P20334 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfrsf9P20334 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfrsf9P20334 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfrsf9P20334 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Tnfrsf9P20334 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfrsf9P20334 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.92□□□□□ -0.02
Tnfrsf9P20334 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tnfrsf9P20334 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Tnfrsf9P20334 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Tnfrsf9P20334 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tnfrsf9P20334 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tnfrsf9P20334 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tnfrsf9P20334 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.91□□□□□ -0.02
Tnfrsf9P20334 Gm27275-201ENSMUST00000184318 272 ntBASIC14.91□□□□□ -0.02
Tnfrsf9P20334 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tnfrsf9P20334 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tnfrsf9P20334 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tnfrsf9P20334 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tnfrsf9P20334 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tnfrsf9P20334 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tnfrsf9P20334 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Tnfrsf9P20334 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Tnfrsf9P20334 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tnfrsf9P20334 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tnfrsf9P20334 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tnfrsf9P20334 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tnfrsf9P20334 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms