Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rb1P13405 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Rb1P13405 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Rb1P13405 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.76■□□□□ 0.59
Rb1P13405 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rb1P13405 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rb1P13405 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rb1P13405 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rb1P13405 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.76■□□□□ 0.59
Rb1P13405 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rb1P13405 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rb1P13405 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Rb1P13405 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rb1P13405 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rb1P13405 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rb1P13405 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rb1P13405 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rb1P13405 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rb1P13405 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rb1P13405 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rb1P13405 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rb1P13405 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rb1P13405 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rb1P13405 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Rb1P13405 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rb1P13405 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rb1P13405 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rb1P13405 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rb1P13405 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rb1P13405 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rb1P13405 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rb1P13405 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rb1P13405 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rb1P13405 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rb1P13405 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.74■□□□□ 0.59
Rb1P13405 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rb1P13405 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rb1P13405 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rb1P13405 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rb1P13405 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.74■□□□□ 0.59
Rb1P13405 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Rb1P13405 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rb1P13405 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rb1P13405 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rb1P13405 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rb1P13405 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
Rb1P13405 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.73■□□□□ 0.59
Rb1P13405 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.73■□□□□ 0.59
Rb1P13405 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rb1P13405 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rb1P13405 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.73■□□□□ 0.59
Rb1P13405 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rb1P13405 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.73■□□□□ 0.59
Rb1P13405 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.73■□□□□ 0.59
Rb1P13405 Trmt13-210ENSMUST00000198454 880 ntBASIC18.73■□□□□ 0.59
Rb1P13405 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rb1P13405 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rb1P13405 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rb1P13405 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Rb1P13405 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rb1P13405 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rb1P13405 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rb1P13405 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rb1P13405 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rb1P13405 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rb1P13405 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rb1P13405 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rb1P13405 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rb1P13405 Gm26524-201ENSMUST00000192339 390 ntBASIC18.72■□□□□ 0.59
Rb1P13405 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.72■□□□□ 0.59
Rb1P13405 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rb1P13405 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rb1P13405 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rb1P13405 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rb1P13405 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rb1P13405 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rb1P13405 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.71■□□□□ 0.59
Rb1P13405 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rb1P13405 Rab3c-203ENSMUST00000224180 967 ntBASIC18.71■□□□□ 0.59
Rb1P13405 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rb1P13405 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rb1P13405 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rb1P13405 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rb1P13405 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rb1P13405 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rb1P13405 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rb1P13405 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Rb1P13405 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rb1P13405 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rb1P13405 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Rb1P13405 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Rb1P13405 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Rb1P13405 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.7■□□□□ 0.58
Rb1P13405 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rb1P13405 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rb1P13405 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rb1P13405 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rb1P13405 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rb1P13405 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.7■□□□□ 0.58
Rb1P13405 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms