Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cntn1P12960 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cntn1P12960 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cntn1P12960 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.7■□□□□ 0.42
Cntn1P12960 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.7■□□□□ 0.42
Cntn1P12960 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cntn1P12960 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cntn1P12960 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Cntn1P12960 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Cntn1P12960 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cntn1P12960 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.69■□□□□ 0.42
Cntn1P12960 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Cntn1P12960 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cntn1P12960 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cntn1P12960 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cntn1P12960 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cntn1P12960 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cntn1P12960 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cntn1P12960 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Cntn1P12960 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cntn1P12960 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cntn1P12960 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cntn1P12960 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cntn1P12960 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Cntn1P12960 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cntn1P12960 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cntn1P12960 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cntn1P12960 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Cntn1P12960 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cntn1P12960 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cntn1P12960 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Cntn1P12960 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Cntn1P12960 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Cntn1P12960 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cntn1P12960 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cntn1P12960 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cntn1P12960 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cntn1P12960 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cntn1P12960 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.68■□□□□ 0.42
Cntn1P12960 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cntn1P12960 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.68■□□□□ 0.42
Cntn1P12960 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cntn1P12960 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Cntn1P12960 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cntn1P12960 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cntn1P12960 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cntn1P12960 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Cntn1P12960 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cntn1P12960 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cntn1P12960 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cntn1P12960 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.67■□□□□ 0.42
Cntn1P12960 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cntn1P12960 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cntn1P12960 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cntn1P12960 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.67■□□□□ 0.42
Cntn1P12960 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.67■□□□□ 0.42
Cntn1P12960 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cntn1P12960 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Cntn1P12960 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cntn1P12960 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.67■□□□□ 0.42
Cntn1P12960 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cntn1P12960 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cntn1P12960 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cntn1P12960 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cntn1P12960 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cntn1P12960 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Cntn1P12960 Gm20760-201ENSMUST00000179197 648 ntBASIC17.66■□□□□ 0.42
Cntn1P12960 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cntn1P12960 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.66■□□□□ 0.42
Cntn1P12960 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cntn1P12960 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cntn1P12960 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cntn1P12960 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cntn1P12960 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cntn1P12960 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cntn1P12960 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cntn1P12960 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cntn1P12960 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Cntn1P12960 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cntn1P12960 Gm37856-201ENSMUST00000191634 999 ntBASIC17.65■□□□□ 0.42
Cntn1P12960 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cntn1P12960 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Cntn1P12960 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cntn1P12960 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cntn1P12960 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Cntn1P12960 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cntn1P12960 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cntn1P12960 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cntn1P12960 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Cntn1P12960 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cntn1P12960 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.64■□□□□ 0.41
Cntn1P12960 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.64■□□□□ 0.41
Cntn1P12960 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cntn1P12960 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cntn1P12960 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.64■□□□□ 0.41
Cntn1P12960 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cntn1P12960 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cntn1P12960 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cntn1P12960 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cntn1P12960 Gm12896-201ENSMUST00000118430 226 ntBASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms