Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.61■□□□□ 0.89
Hoxc6P10629 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.61■□□□□ 0.89
Hoxc6P10629 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Hoxc6P10629 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hoxc6P10629 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxc6P10629 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Hoxc6P10629 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxc6P10629 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxc6P10629 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Hoxc6P10629 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxc6P10629 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxc6P10629 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxc6P10629 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxc6P10629 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxc6P10629 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxc6P10629 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxc6P10629 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxc6P10629 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Hoxc6P10629 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxc6P10629 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Hoxc6P10629 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Hoxc6P10629 Gm43183-201ENSMUST00000200632 547 ntBASIC20.59■□□□□ 0.89
Hoxc6P10629 Gm10138-203ENSMUST00000206952 366 ntBASIC20.59■□□□□ 0.89
Hoxc6P10629 Mtag2-201ENSMUST00000058665 714 ntBASIC20.59■□□□□ 0.89
Hoxc6P10629 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxc6P10629 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxc6P10629 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxc6P10629 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.59■□□□□ 0.89
Hoxc6P10629 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxc6P10629 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxc6P10629 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Hoxc6P10629 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Hoxc6P10629 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Hoxc6P10629 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hoxc6P10629 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hoxc6P10629 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hoxc6P10629 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hoxc6P10629 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hoxc6P10629 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hoxc6P10629 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.57■□□□□ 0.88
Hoxc6P10629 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Hoxc6P10629 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hoxc6P10629 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hoxc6P10629 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hoxc6P10629 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hoxc6P10629 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hoxc6P10629 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Hoxc6P10629 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Hoxc6P10629 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hoxc6P10629 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxc6P10629 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.56■□□□□ 0.88
Hoxc6P10629 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Hoxc6P10629 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxc6P10629 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxc6P10629 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.56■□□□□ 0.88
Hoxc6P10629 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxc6P10629 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxc6P10629 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxc6P10629 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxc6P10629 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxc6P10629 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxc6P10629 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxc6P10629 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hoxc6P10629 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hoxc6P10629 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hoxc6P10629 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Hoxc6P10629 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Hoxc6P10629 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.55■□□□□ 0.88
Hoxc6P10629 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hoxc6P10629 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hoxc6P10629 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hoxc6P10629 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hoxc6P10629 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Hoxc6P10629 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hoxc6P10629 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Hoxc6P10629 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hoxc6P10629 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxc6P10629 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Hoxc6P10629 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxc6P10629 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Hoxc6P10629 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxc6P10629 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.54■□□□□ 0.88
Hoxc6P10629 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxc6P10629 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.54■□□□□ 0.88
Hoxc6P10629 Gm18025-201ENSMUST00000221733 862 ntBASIC20.54■□□□□ 0.88
Hoxc6P10629 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxc6P10629 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.54■□□□□ 0.88
Hoxc6P10629 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxc6P10629 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Hoxc6P10629 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Hoxc6P10629 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxc6P10629 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Hoxc6P10629 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxc6P10629 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxc6P10629 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.53■□□□□ 0.88
Hoxc6P10629 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.53■□□□□ 0.88
Hoxc6P10629 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxc6P10629 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxc6P10629 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxc6P10629 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms