Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PtcraP0C6B2 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PtcraP0C6B2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PtcraP0C6B2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
PtcraP0C6B2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PtcraP0C6B2 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PtcraP0C6B2 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PtcraP0C6B2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.03■□□□□ 0.16
PtcraP0C6B2 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PtcraP0C6B2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PtcraP0C6B2 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.03■□□□□ 0.16
PtcraP0C6B2 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PtcraP0C6B2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PtcraP0C6B2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PtcraP0C6B2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PtcraP0C6B2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PtcraP0C6B2 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PtcraP0C6B2 Gm22325-201ENSMUST00000158904 308 ntBASIC16.02■□□□□ 0.16
PtcraP0C6B2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.02■□□□□ 0.16
PtcraP0C6B2 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
PtcraP0C6B2 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PtcraP0C6B2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
PtcraP0C6B2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
PtcraP0C6B2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PtcraP0C6B2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PtcraP0C6B2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PtcraP0C6B2 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PtcraP0C6B2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
PtcraP0C6B2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PtcraP0C6B2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PtcraP0C6B2 Gm7291-201ENSMUST00000199147 382 ntBASIC16.01■□□□□ 0.15
PtcraP0C6B2 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PtcraP0C6B2 Gm6365-201ENSMUST00000054711 744 ntBASIC16.01■□□□□ 0.15
PtcraP0C6B2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.01■□□□□ 0.15
PtcraP0C6B2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PtcraP0C6B2 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PtcraP0C6B2 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
PtcraP0C6B2 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PtcraP0C6B2 Gm12933-201ENSMUST00000120203 872 ntBASIC16■□□□□ 0.15
PtcraP0C6B2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16■□□□□ 0.15
PtcraP0C6B2 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16■□□□□ 0.15
PtcraP0C6B2 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PtcraP0C6B2 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16■□□□□ 0.15
PtcraP0C6B2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PtcraP0C6B2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PtcraP0C6B2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
PtcraP0C6B2 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
PtcraP0C6B2 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PtcraP0C6B2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PtcraP0C6B2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PtcraP0C6B2 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PtcraP0C6B2 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PtcraP0C6B2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PtcraP0C6B2 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PtcraP0C6B2 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PtcraP0C6B2 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PtcraP0C6B2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.99■□□□□ 0.15
PtcraP0C6B2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PtcraP0C6B2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.99■□□□□ 0.15
PtcraP0C6B2 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PtcraP0C6B2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PtcraP0C6B2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PtcraP0C6B2 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PtcraP0C6B2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PtcraP0C6B2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
PtcraP0C6B2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PtcraP0C6B2 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.98■□□□□ 0.15
PtcraP0C6B2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PtcraP0C6B2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PtcraP0C6B2 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PtcraP0C6B2 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PtcraP0C6B2 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.98■□□□□ 0.15
PtcraP0C6B2 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PtcraP0C6B2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PtcraP0C6B2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PtcraP0C6B2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PtcraP0C6B2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PtcraP0C6B2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.97■□□□□ 0.15
PtcraP0C6B2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PtcraP0C6B2 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PtcraP0C6B2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
PtcraP0C6B2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
PtcraP0C6B2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
PtcraP0C6B2 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
PtcraP0C6B2 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PtcraP0C6B2 Gm6211-202ENSMUST00000167849 925 ntBASIC15.97■□□□□ 0.15
PtcraP0C6B2 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PtcraP0C6B2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC15.97■□□□□ 0.15
PtcraP0C6B2 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PtcraP0C6B2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PtcraP0C6B2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PtcraP0C6B2 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PtcraP0C6B2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PtcraP0C6B2 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PtcraP0C6B2 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PtcraP0C6B2 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PtcraP0C6B2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PtcraP0C6B2 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PtcraP0C6B2 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.96■□□□□ 0.15
PtcraP0C6B2 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms