Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
P06328 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
P06328 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC13.53□□□□□ -0.24
P06328 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
P06328 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
P06328 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
P06328 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
P06328 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
P06328 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
P06328 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
P06328 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
P06328 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
P06328 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
P06328 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P06328 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
P06328 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC13.52□□□□□ -0.25
P06328 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC13.52□□□□□ -0.25
P06328 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P06328 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
P06328 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
P06328 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P06328 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P06328 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P06328 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P06328 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P06328 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
P06328 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P06328 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P06328 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P06328 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P06328 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
P06328 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P06328 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P06328 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
P06328 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
P06328 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P06328 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P06328 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
P06328 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC13.51□□□□□ -0.25
P06328 Gm38205-201ENSMUST00000192243 258 ntBASIC13.51□□□□□ -0.25
P06328 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC13.51□□□□□ -0.25
P06328 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC13.51□□□□□ -0.25
P06328 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC13.51□□□□□ -0.25
P06328 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P06328 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P06328 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P06328 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P06328 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
P06328 Dmtn-207ENSMUST00000228001 2437 ntBASIC13.51□□□□□ -0.25
P06328 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
P06328 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
P06328 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
P06328 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P06328 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P06328 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
P06328 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P06328 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
P06328 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
P06328 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC13.5□□□□□ -0.25
P06328 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
P06328 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC13.5□□□□□ -0.25
P06328 Gm45417-201ENSMUST00000209533 758 ntBASIC13.5□□□□□ -0.25
P06328 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
P06328 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC13.5□□□□□ -0.25
P06328 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
P06328 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P06328 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
P06328 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
P06328 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
P06328 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P06328 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
P06328 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P06328 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC13.5□□□□□ -0.25
P06328 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
P06328 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P06328 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC13.5□□□□□ -0.25
P06328 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
P06328 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
P06328 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
P06328 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
P06328 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P06328 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P06328 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P06328 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P06328 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P06328 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
P06328 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P06328 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
P06328 Gm45141-201ENSMUST00000206502 1888 ntBASIC13.49□□□□□ -0.25
P06328 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P06328 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P06328 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P06328 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P06328 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P06328 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P06328 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P06328 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
P06328 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
P06328 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P06328 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms