Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Col4a1P02463 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Col4a1P02463 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Col4a1P02463 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC22.96■■□□□ 1.27
Col4a1P02463 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Col4a1P02463 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Col4a1P02463 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Col4a1P02463 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
Col4a1P02463 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.27
Col4a1P02463 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Col4a1P02463 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
Col4a1P02463 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC22.95■■□□□ 1.26
Col4a1P02463 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
Col4a1P02463 Gm10231-201ENSMUST00000181584 441 ntBASIC22.95■■□□□ 1.26
Col4a1P02463 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Col4a1P02463 Gm21814-202ENSMUST00000203277 873 ntBASIC22.95■■□□□ 1.26
Col4a1P02463 Gm10175-202ENSMUST00000208752 441 ntBASIC22.95■■□□□ 1.26
Col4a1P02463 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Col4a1P02463 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Col4a1P02463 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Col4a1P02463 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Col4a1P02463 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Col4a1P02463 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
Col4a1P02463 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC22.94■■□□□ 1.26
Col4a1P02463 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC22.94■■□□□ 1.26
Col4a1P02463 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
Col4a1P02463 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC22.94■■□□□ 1.26
Col4a1P02463 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Col4a1P02463 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Col4a1P02463 Gm8668-201ENSMUST00000120559 1447 ntBASIC22.94■■□□□ 1.26
Col4a1P02463 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Col4a1P02463 Gm15375-201ENSMUST00000119510 849 ntBASIC22.93■■□□□ 1.26
Col4a1P02463 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC22.93■■□□□ 1.26
Col4a1P02463 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Col4a1P02463 Gm11643-201ENSMUST00000119578 864 ntBASIC22.93■■□□□ 1.26
Col4a1P02463 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC22.93■■□□□ 1.26
Col4a1P02463 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Col4a1P02463 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC22.93■■□□□ 1.26
Col4a1P02463 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Col4a1P02463 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Col4a1P02463 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Col4a1P02463 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Col4a1P02463 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Col4a1P02463 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC22.92■■□□□ 1.26
Col4a1P02463 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Col4a1P02463 Gm44544-201ENSMUST00000207052 1844 ntBASIC22.92■■□□□ 1.26
Col4a1P02463 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Col4a1P02463 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Col4a1P02463 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Col4a1P02463 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Col4a1P02463 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Col4a1P02463 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Col4a1P02463 Gm38285-201ENSMUST00000192928 922 ntBASIC22.91■■□□□ 1.26
Col4a1P02463 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC22.91■■□□□ 1.26
Col4a1P02463 Gm3375-201ENSMUST00000203929 796 ntBASIC22.91■■□□□ 1.26
Col4a1P02463 Arhgef4-208ENSMUST00000211073 171 ntBASIC22.91■■□□□ 1.26
Col4a1P02463 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC22.91■■□□□ 1.26
Col4a1P02463 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Col4a1P02463 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
Col4a1P02463 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Col4a1P02463 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Col4a1P02463 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Col4a1P02463 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
Col4a1P02463 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Col4a1P02463 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Col4a1P02463 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC22.9■■□□□ 1.26
Col4a1P02463 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Col4a1P02463 Otx2os1-204ENSMUST00000227221 751 ntBASIC22.9■■□□□ 1.26
Col4a1P02463 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC22.9■■□□□ 1.26
Col4a1P02463 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC22.9■■□□□ 1.26
Col4a1P02463 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC22.9■■□□□ 1.26
Col4a1P02463 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
Col4a1P02463 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Col4a1P02463 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Col4a1P02463 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Col4a1P02463 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Col4a1P02463 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Col4a1P02463 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Col4a1P02463 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC22.89■■□□□ 1.25
Col4a1P02463 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC22.89■■□□□ 1.25
Col4a1P02463 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Col4a1P02463 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
Col4a1P02463 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Col4a1P02463 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Col4a1P02463 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Col4a1P02463 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Col4a1P02463 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC22.87■■□□□ 1.25
Col4a1P02463 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Col4a1P02463 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Col4a1P02463 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC22.87■■□□□ 1.25
Col4a1P02463 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Col4a1P02463 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Col4a1P02463 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Col4a1P02463 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Col4a1P02463 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC22.86■■□□□ 1.25
Col4a1P02463 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Col4a1P02463 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Col4a1P02463 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
Col4a1P02463 Gm10138-203ENSMUST00000206952 366 ntBASIC22.86■■□□□ 1.25
Col4a1P02463 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms