Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.01■□□□□ 0.15
Igh-VJ558P01758 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16■□□□□ 0.15
Igh-VJ558P01758 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Igh-VJ558P01758 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Igh-VJ558P01758 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Igh-VJ558P01758 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16■□□□□ 0.15
Igh-VJ558P01758 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Igh-VJ558P01758 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Igh-VJ558P01758 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16■□□□□ 0.15
Igh-VJ558P01758 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16■□□□□ 0.15
Igh-VJ558P01758 Nespas-201ENSMUST00000143738 1083 ntBASIC16■□□□□ 0.15
Igh-VJ558P01758 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16■□□□□ 0.15
Igh-VJ558P01758 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
Igh-VJ558P01758 Gm7514-201ENSMUST00000209475 934 ntBASIC16■□□□□ 0.15
Igh-VJ558P01758 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16■□□□□ 0.15
Igh-VJ558P01758 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16■□□□□ 0.15
Igh-VJ558P01758 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Igh-VJ558P01758 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Igh-VJ558P01758 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Igh-VJ558P01758 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Igh-VJ558P01758 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Igh-VJ558P01758 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Igh-VJ558P01758 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16■□□□□ 0.15
Igh-VJ558P01758 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Igh-VJ558P01758 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Igh-VJ558P01758 Gm18671-201ENSMUST00000214826 683 ntBASIC15.99■□□□□ 0.15
Igh-VJ558P01758 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Igh-VJ558P01758 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Igh-VJ558P01758 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Igh-VJ558P01758 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Igh-VJ558P01758 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Igh-VJ558P01758 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Igh-VJ558P01758 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Igh-VJ558P01758 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
Igh-VJ558P01758 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.98■□□□□ 0.15
Igh-VJ558P01758 AC121961.1-201ENSMUST00000218594 1779 ntBASIC15.98■□□□□ 0.15
Igh-VJ558P01758 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Igh-VJ558P01758 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Igh-VJ558P01758 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Igh-VJ558P01758 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Igh-VJ558P01758 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Igh-VJ558P01758 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Igh-VJ558P01758 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Igh-VJ558P01758 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.98■□□□□ 0.15
Igh-VJ558P01758 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Igh-VJ558P01758 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Igh-VJ558P01758 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Igh-VJ558P01758 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Igh-VJ558P01758 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Igh-VJ558P01758 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Igh-VJ558P01758 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.98■□□□□ 0.15
Igh-VJ558P01758 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Igh-VJ558P01758 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Igh-VJ558P01758 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC15.98■□□□□ 0.15
Igh-VJ558P01758 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Igh-VJ558P01758 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.97■□□□□ 0.15
Igh-VJ558P01758 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Igh-VJ558P01758 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC15.97■□□□□ 0.15
Igh-VJ558P01758 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Igh-VJ558P01758 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Igh-VJ558P01758 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Igh-VJ558P01758 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC15.97■□□□□ 0.15
Igh-VJ558P01758 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Igh-VJ558P01758 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Igh-VJ558P01758 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Igh-VJ558P01758 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Igh-VJ558P01758 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Igh-VJ558P01758 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Igh-VJ558P01758 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Igh-VJ558P01758 Gm18284-201ENSMUST00000172604 624 ntBASIC15.97■□□□□ 0.15
Igh-VJ558P01758 AV356131-201ENSMUST00000206201 750 ntBASIC15.97■□□□□ 0.15
Igh-VJ558P01758 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC15.97■□□□□ 0.15
Igh-VJ558P01758 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Igh-VJ558P01758 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Igh-VJ558P01758 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Igh-VJ558P01758 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Igh-VJ558P01758 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.97■□□□□ 0.15
Igh-VJ558P01758 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Igh-VJ558P01758 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Igh-VJ558P01758 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Igh-VJ558P01758 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Igh-VJ558P01758 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Igh-VJ558P01758 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.96■□□□□ 0.15
Igh-VJ558P01758 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Igh-VJ558P01758 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Igh-VJ558P01758 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Igh-VJ558P01758 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC15.96■□□□□ 0.15
Igh-VJ558P01758 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Igh-VJ558P01758 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC15.96■□□□□ 0.15
Igh-VJ558P01758 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC15.96■□□□□ 0.15
Igh-VJ558P01758 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
Igh-VJ558P01758 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.96■□□□□ 0.15
Igh-VJ558P01758 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Igh-VJ558P01758 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Igh-VJ558P01758 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Igh-VJ558P01758 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Igh-VJ558P01758 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Igh-VJ558P01758 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Igh-VJ558P01758 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Igh-VJ558P01758 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms