Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Syn1O88935 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Syn1O88935 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Syn1O88935 Gm7461-201ENSMUST00000058918 827 ntBASIC19.05■□□□□ 0.64
Syn1O88935 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Syn1O88935 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Syn1O88935 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.05■□□□□ 0.64
Syn1O88935 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Syn1O88935 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
Syn1O88935 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Syn1O88935 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Syn1O88935 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Syn1O88935 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Syn1O88935 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Syn1O88935 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Syn1O88935 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Syn1O88935 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.04■□□□□ 0.64
Syn1O88935 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Syn1O88935 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC19.04■□□□□ 0.64
Syn1O88935 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Syn1O88935 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.04■□□□□ 0.64
Syn1O88935 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.04■□□□□ 0.64
Syn1O88935 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Syn1O88935 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Syn1O88935 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Syn1O88935 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Syn1O88935 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Syn1O88935 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.04■□□□□ 0.64
Syn1O88935 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Syn1O88935 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Syn1O88935 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Syn1O88935 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Syn1O88935 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Syn1O88935 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.03■□□□□ 0.64
Syn1O88935 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Syn1O88935 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.03■□□□□ 0.64
Syn1O88935 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.03■□□□□ 0.64
Syn1O88935 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Syn1O88935 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Syn1O88935 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Syn1O88935 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.03■□□□□ 0.64
Syn1O88935 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Syn1O88935 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Syn1O88935 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Syn1O88935 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Syn1O88935 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Syn1O88935 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Syn1O88935 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.02■□□□□ 0.64
Syn1O88935 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.02■□□□□ 0.64
Syn1O88935 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.02■□□□□ 0.64
Syn1O88935 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Syn1O88935 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.02■□□□□ 0.63
Syn1O88935 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Syn1O88935 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Syn1O88935 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Syn1O88935 Gm18959-201ENSMUST00000208954 655 ntBASIC19.01■□□□□ 0.63
Syn1O88935 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Syn1O88935 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Syn1O88935 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Syn1O88935 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Syn1O88935 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Syn1O88935 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Syn1O88935 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Syn1O88935 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Syn1O88935 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19■□□□□ 0.63
Syn1O88935 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Syn1O88935 Odf3b-204ENSMUST00000227834 930 ntBASIC19■□□□□ 0.63
Syn1O88935 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Syn1O88935 Mtag2-201ENSMUST00000058665 714 ntBASIC19■□□□□ 0.63
Syn1O88935 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19■□□□□ 0.63
Syn1O88935 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19■□□□□ 0.63
Syn1O88935 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Syn1O88935 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Syn1O88935 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Syn1O88935 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Syn1O88935 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Syn1O88935 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19■□□□□ 0.63
Syn1O88935 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Syn1O88935 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19■□□□□ 0.63
Syn1O88935 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Syn1O88935 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Syn1O88935 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Syn1O88935 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Syn1O88935 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.99■□□□□ 0.63
Syn1O88935 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Syn1O88935 Timm23-208ENSMUST00000226683 750 ntBASIC18.99■□□□□ 0.63
Syn1O88935 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Syn1O88935 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Syn1O88935 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.99■□□□□ 0.63
Syn1O88935 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.99■□□□□ 0.63
Syn1O88935 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Syn1O88935 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Syn1O88935 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Syn1O88935 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.98■□□□□ 0.63
Syn1O88935 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.98■□□□□ 0.63
Syn1O88935 Gm12382-201ENSMUST00000122005 922 ntBASIC18.98■□□□□ 0.63
Syn1O88935 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.98■□□□□ 0.63
Syn1O88935 Gm3375-201ENSMUST00000203929 796 ntBASIC18.98■□□□□ 0.63
Syn1O88935 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Syn1O88935 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms