Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.65■□□□□ 0.42
Hcn3O88705 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
Hcn3O88705 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hcn3O88705 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hcn3O88705 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hcn3O88705 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Hcn3O88705 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hcn3O88705 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Hcn3O88705 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hcn3O88705 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hcn3O88705 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hcn3O88705 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Hcn3O88705 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hcn3O88705 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hcn3O88705 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.64■□□□□ 0.41
Hcn3O88705 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hcn3O88705 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.64■□□□□ 0.41
Hcn3O88705 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.64■□□□□ 0.41
Hcn3O88705 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hcn3O88705 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
Hcn3O88705 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hcn3O88705 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hcn3O88705 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hcn3O88705 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hcn3O88705 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hcn3O88705 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hcn3O88705 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hcn3O88705 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hcn3O88705 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hcn3O88705 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.63■□□□□ 0.41
Hcn3O88705 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hcn3O88705 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hcn3O88705 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Hcn3O88705 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hcn3O88705 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hcn3O88705 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hcn3O88705 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hcn3O88705 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
Hcn3O88705 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hcn3O88705 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hcn3O88705 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hcn3O88705 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hcn3O88705 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Hcn3O88705 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hcn3O88705 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hcn3O88705 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.62■□□□□ 0.41
Hcn3O88705 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hcn3O88705 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hcn3O88705 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Hcn3O88705 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.62■□□□□ 0.41
Hcn3O88705 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hcn3O88705 Gm27454-201ENSMUST00000185090 204 ntBASIC17.62■□□□□ 0.41
Hcn3O88705 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hcn3O88705 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.62■□□□□ 0.41
Hcn3O88705 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.62■□□□□ 0.41
Hcn3O88705 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.62■□□□□ 0.41
Hcn3O88705 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Hcn3O88705 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hcn3O88705 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hcn3O88705 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.62■□□□□ 0.41
Hcn3O88705 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hcn3O88705 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hcn3O88705 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hcn3O88705 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hcn3O88705 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hcn3O88705 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hcn3O88705 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.61■□□□□ 0.41
Hcn3O88705 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.61■□□□□ 0.41
Hcn3O88705 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hcn3O88705 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hcn3O88705 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Hcn3O88705 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.61■□□□□ 0.41
Hcn3O88705 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Hcn3O88705 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.61■□□□□ 0.41
Hcn3O88705 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hcn3O88705 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hcn3O88705 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hcn3O88705 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.61■□□□□ 0.41
Hcn3O88705 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hcn3O88705 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Hcn3O88705 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hcn3O88705 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hcn3O88705 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hcn3O88705 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hcn3O88705 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Hcn3O88705 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hcn3O88705 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hcn3O88705 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hcn3O88705 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hcn3O88705 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hcn3O88705 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Hcn3O88705 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hcn3O88705 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hcn3O88705 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hcn3O88705 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hcn3O88705 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hcn3O88705 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hcn3O88705 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Hcn3O88705 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.59■□□□□ 0.41
Hcn3O88705 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms