Protein–RNA interactions for Protein: O88689

Pcdha4, Protocadherin alpha-4, mousemouse

Predictions only

Length 947 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha4O88689 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha4O88689 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha4O88689 Golph3-205ENSMUST00000228671 2842 ntBASIC20.66■□□□□ 0.9
Pcdha4O88689 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha4O88689 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.66■□□□□ 0.9
Pcdha4O88689 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.66■□□□□ 0.9
Pcdha4O88689 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha4O88689 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha4O88689 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha4O88689 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha4O88689 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha4O88689 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha4O88689 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha4O88689 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdha4O88689 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdha4O88689 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdha4O88689 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdha4O88689 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdha4O88689 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Pcdha4O88689 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.64■□□□□ 0.9
Pcdha4O88689 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdha4O88689 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdha4O88689 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdha4O88689 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Pcdha4O88689 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Pcdha4O88689 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Pcdha4O88689 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdha4O88689 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Pcdha4O88689 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Pcdha4O88689 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdha4O88689 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdha4O88689 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.63■□□□□ 0.89
Pcdha4O88689 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdha4O88689 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdha4O88689 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Pcdha4O88689 Gm22325-201ENSMUST00000158904 308 ntBASIC20.63■□□□□ 0.89
Pcdha4O88689 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.63■□□□□ 0.89
Pcdha4O88689 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdha4O88689 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Pcdha4O88689 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdha4O88689 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Pcdha4O88689 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha4O88689 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.62■□□□□ 0.89
Pcdha4O88689 Gm12441-201ENSMUST00000121806 588 ntBASIC20.62■□□□□ 0.89
Pcdha4O88689 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha4O88689 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha4O88689 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Pcdha4O88689 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha4O88689 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha4O88689 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha4O88689 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.61■□□□□ 0.89
Pcdha4O88689 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha4O88689 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.61■□□□□ 0.89
Pcdha4O88689 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.61■□□□□ 0.89
Pcdha4O88689 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha4O88689 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha4O88689 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha4O88689 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha4O88689 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha4O88689 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha4O88689 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha4O88689 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.6■□□□□ 0.89
Pcdha4O88689 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.6■□□□□ 0.89
Pcdha4O88689 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.6■□□□□ 0.89
Pcdha4O88689 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.6■□□□□ 0.89
Pcdha4O88689 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha4O88689 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha4O88689 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.6■□□□□ 0.89
Pcdha4O88689 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha4O88689 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha4O88689 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha4O88689 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha4O88689 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha4O88689 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha4O88689 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Pcdha4O88689 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.59■□□□□ 0.89
Pcdha4O88689 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha4O88689 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha4O88689 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha4O88689 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.59■□□□□ 0.89
Pcdha4O88689 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.59■□□□□ 0.89
Pcdha4O88689 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Pcdha4O88689 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha4O88689 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Pcdha4O88689 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha4O88689 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha4O88689 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha4O88689 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Pcdha4O88689 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdha4O88689 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Pcdha4O88689 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdha4O88689 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.58■□□□□ 0.89
Pcdha4O88689 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
Pcdha4O88689 Gm44549-201ENSMUST00000208351 577 ntBASIC20.58■□□□□ 0.89
Pcdha4O88689 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.58■□□□□ 0.89
Pcdha4O88689 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdha4O88689 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdha4O88689 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdha4O88689 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdha4O88689 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms